DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and Tsp42Ep

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001260759.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster


Alignment Length:240 Identity:55/240 - (22%)
Similarity:94/240 - (39%) Gaps:51/240 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVG------------ETFTANSVAIIILVLG 60
            :||...:.|:|:::.||      .:|       ||.|            .|:...|     ||||
  Fly     8 IKYTGLLSNLLYMLLGI------GVM-------SGAGLGLQMAEPNTPEHTYFVKS-----LVLG 54

  Fly    61 CVVFLVAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLE------KIVQ 119
            ..:.::...||.|.:....|....:::.:|:.|.::     |:.:.|.. ..||.      :.::
  Fly    55 GSICMIVMFGCYGMVANLLCVNLIFTMFILIALAAE-----YLQLHHYH-SPSLRSPGGAWQQLE 113

  Fly   120 TIWDQRKTDALLMDTLQRSFKCCGLNGFADY---GITYPASCCDSPSNGTCALTQVMTRSSCLKA 181
            ..|.....|..||...:.|..|||.||..||   .:..||||..:..|.|   .|.:..|.||:.
  Fly   114 LAWHGLDRDPELMHQYEASQHCCGYNGADDYKRLHLLVPASCYQAAVNDT---AQQIYPSGCLET 175

  Fly   182 VD---SFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRNSQR 223
            ::   .:......:..:|.:|:....|:..:....|..:.|..||
  Fly   176 LNRSQRYIQHRDKLYMWAIVGLEIFILLQTVALSVLLFRLRQRQR 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 52/232 (22%)
tetraspanin_LEL 104..189 CDD:239401 25/96 (26%)
Tsp42EpNP_001260759.1 Tetraspannin <51..213 CDD:278750 40/170 (24%)
tetraspanin_LEL 91..183 CDD:239401 26/95 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467736
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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