DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and Tsp42Eo

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_523641.2 Gene:Tsp42Eo / 35625 FlyBaseID:FBgn0033136 Length:219 Species:Drosophila melanogaster


Alignment Length:230 Identity:60/230 - (26%)
Similarity:94/230 - (40%) Gaps:24/230 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFMG 70
            |.:::...:|:.|.:|.|:|....|      :.:.....|....::...:.|.:...:.|...:|
  Fly     6 VCLQWTSVVFSTLTLIVGVLAALAG------VYELDKFNEGSAEHTEKFVQLGMAGALILAGLVG 64

  Fly    71 CCGAIRENSCALTSYSVVMLVLLVSQLALII-YVW-VDHVQIQQSL---EKIVQTIWDQRKTDAL 130
            |.|||       .....||:|.|:..||||. ::| |.|....:.|   |..|..:|.:......
  Fly    65 CLGAI-------FGSIKVMVVNLILLLALIASHIWKVSHYNETKQLDATEVYVMDLWMKELVHHG 122

  Fly   131 LMDTLQRSFKCCGLNGFADY---GITYPASCCDSPSNGTCALTQVMTRSSCLKAVDSFWDTNVSI 192
            .|..||:.::|||..||:||   .:..|.||..: .:|..||...  ...|:.||...:......
  Fly   123 AMQDLQQEYECCGDKGFSDYTSLNMKVPRSCFHT-KDGIHALYPY--GEGCMAAVKRAYLQIYRY 184

  Fly   193 IKYAGLGVTAVELVAFIFACCLANQTRNSQRRQNY 227
            .|:...|:...|:|..|....|..|..|..||..|
  Fly   185 EKWVHCGLIGYEVVGIILGITLCCQLTNKTRRYTY 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 54/216 (25%)
tetraspanin_LEL 104..189 CDD:239401 26/91 (29%)
Tsp42EoNP_523641.2 Tetraspannin 7..210 CDD:278750 54/218 (25%)
tetraspanin_LEL 110..178 CDD:239401 21/70 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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