Protein Alignment Tsp42Ed and Tspan3

DIOPT Version :9

• Sequence 1: NP_001286152.1
• Gene: Tsp42Ed / 35613
• FlyBaseID: FBgn0029507
• Length: 227
• Species: Drosophila melanogaster
• Sequence 2: NP_001005547.1
• Gene: Tspan3 / 300733
• RGDID: 1359444
• Length: 253
• Species: Rattus norvegicus
• Alignment Length: 237
• Identity: 55/237 - (23%)
• Similarity: 115/237 - (48%)
• Gaps: 19/237 - (8%)

  Fly     3 CGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVA 67
            ||....|.||...|::|.....:|...|:.:..|..|:....|.......|::|:.:|.::|::.
  Rat     4 CGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLFPAVVIMAVGALLFIIG 68

  Fly    68 FMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTI---WDQRKTDA 129
            .:|||..|||:.|.|.::..::|::.|:::.:::..:|...:::..:::.:|.:   ::...:||
  Rat    69 LIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSDA 133

  Fly   130 L--LMDTLQRSFKCCGLNGFADYGIT----------YPASCCDSPS---NGTCALTQVMTRSSCL 179
            .  .:|.:||...|||::.::|:..|          .|.|||...:   ||:.|....:....|.
  Rat   134 ASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETARSCNGSLANPSDLYAEGCE 198

  Fly   180 KAVDSFWDTNVSIIKYAGLGVTAVELVAFIFAC-CLANQTRN 220
            ..|.......:..:.:|.|...|::|:..:.|| .|..::|:
  Rat   199 ALVVKKLQEILMHVIWAALAFAAIQLLGMLCACIVLCRRSRD 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ed	NP_001286152.1	Tetraspannin	8..217	CDD:278750	52/227 (23%)
		tetraspanin_LEL	104..189	CDD:239401	21/102 (21%)
Tspan3	NP_001005547.1	Tetraspannin	10..237	CDD:278750	52/226 (23%)
		TM4SF8_like_LEL	104..210	CDD:239416	21/105 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1406905at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820