Protein Alignment Tsp42Ed and Tspan3

DIOPT Version :10

• Sequence 1: NP_523630.1
• Gene: Tsp42Ed / 35613
• FlyBaseID: FBgn0029507
• Length: 227
• Species: Drosophila melanogaster
• Sequence 2: XP_063121188.1
• Gene: Tspan3 / 300733
• RGDID: 1359444
• Length: 270
• Species: Rattus norvegicus
• Alignment Length: 253
• Identity: 56/253 - (22%)
• Similarity: 119/253 - (47%)
• Gaps: 37/253 - (14%)

  Fly     3 CGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVA 67
            ||....|.||...|::|.....:|...|:.:..|..|:....|.......|::|:.:|.::|::.
  Rat     4 CGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLFPAVVIMAVGALLFIIG 68

  Fly    68 FMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTI---WDQRKTDA 129
            .:|||..|||:.|.|.::..::|::.|:::.:::..:|...:::..:::.:|.:   ::...:||
  Rat    69 LIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSDA 133

  Fly   130 L--LMDTLQRSFKCCGLNGFADYGIT----------YPASCCDSPS---NGTCALTQVMTRSSC- 178
            .  .:|.:||...|||::.::|:..|          .|.|||...:   ||:.|....:....|
  Rat   134 ASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETARSCNGSLANPSDLYAEGCE 198

  Fly   179 ---LKAVDS-----FWDTNVSIIKYAGLGVTAV------ELVAFIFACCLANQTRNSQ 222
               :|.:..     .|    :.:.:|.:.|:.|      |:|..:.:..:|..|:.|:
  Rat   199 ALVVKKLQEILMHVIW----AALAFAAIQVSRVTKQLLSEVVCPLVSAEIALATKQSE 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ed	NP_523630.1	Tetraspanin	8..216	CDD:459767	51/240 (21%)
Tspan3	XP_063121188.1	None