DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and TSPAN16

DIOPT Version :10

Sequence 1:NP_523630.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_036598.1 Gene:TSPAN16 / 26526 HGNCID:30725 Length:245 Species:Homo sapiens


Alignment Length:230 Identity:49/230 - (21%)
Similarity:96/230 - (41%) Gaps:44/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILFVICGILLITF---GSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFM 69
            :|.:|.:.|....:.||:|:..   |....:::.:..|:...:..: |..:.||:||:..|:...
Human    11 LKKLLSLLNGFVAVSGIILVGLGIGGKCGGASLTNVLGLSSAYLLH-VGNLCLVMGCITVLLGCA 74

  Fly    70 GCCGAIRENS-----CALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKI------------ 117
            |..||.:|:.     |.|:...|:::.:..:.:.|:.:..|..|.::.:...:            
Human    75 GWYGATKESRGTLLFCILSMVIVLIMEVTAATVVLLFFPIVGDVALEHTFVTLRKNYRGYNEPDD 139

  Fly   118 VQTIWDQRKTDALLMDTLQRSFKCCGLNGFADY---------GITYPASCCDSPSNGTC----AL 169
            ..|.|:      |:|:.|    ||||:|.:.|:         |.|||.|||.|..:.:|    ..
Human   140 YSTQWN------LVMEKL----KCCGVNNYTDFSGSSFEMTTGHTYPRSCCKSIGSVSCDGRDVS 194

  Fly   170 TQVMTRSSCLKAVDSFWDTNVSIIKYAGLGVTAVE 204
            ..|:.:..|...:.....|....:..:.||...::
Human   195 PNVIHQKGCFHKLLKITKTQSFTLSGSSLGAAVIQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_523630.1 Tetraspanin 8..216 CDD:459767 49/230 (21%)
TSPAN16NP_036598.1 Tetraspanin 19..>155 CDD:459767 29/146 (20%)
uroplakin_I_like_LEL 120..215 CDD:239409 23/104 (22%)

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