DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and tsp-8

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:277 Identity:54/277 - (19%)
Similarity:108/277 - (38%) Gaps:67/277 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILFVICGILLITFGSIMV--STIKDFSGVGETFTA--NSVAIIILVLGCVVFLVAF 68
            ::.|.|:||..|.:.|:::...|..::  ....||..:..|...  ..|...::..|.::.||.:
 Worm     8 LRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGAIIILVGY 72

  Fly    69 MGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVW--VDHVQ--IQQSLEKIVQTIWDQRKTDA 129
            .||.||.:.|.|||..:..::::....:||..:.::  .:|::  ::.|:...::..:.......
 Worm    73 FGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRYSSETAFK 137

  Fly   130 LLMDTLQRSFKCCGLNGFADY----------------------------------GITY---PAS 157
            ...||:|..|:|||:..:.|:                                  |..|   |:|
 Worm   138 DAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGTGYGRVPSS 202

  Fly   158 CCDS------PSNGTC----------ALTQVMTRSSCLKAVDSFWDTNVSIIKYAGLGVTAVELV 206
            ||:.      |:|  |          ...|.:....|..||.....:::|:|....:.:..|:|:
 Worm   203 CCNEHGKLSYPNN--CGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVLCIVQLL 265

  Fly   207 AFIFA----CCLANQTR 219
            ..:.:    ||..|..:
 Worm   266 GIVLSMTLCCCKGNSKK 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 53/273 (19%)
tetraspanin_LEL 104..189 CDD:239401 23/141 (16%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 51/269 (19%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 23/94 (24%)
tetraspanin_LEL 108..243 CDD:239401 23/136 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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