DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and tsp-14

DIOPT Version :10

Sequence 1:NP_523630.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001367834.1 Gene:tsp-14 / 180761 WormBaseID:WBGene00006640 Length:451 Species:Caenorhabditis elegans


Alignment Length:302 Identity:69/302 - (22%)
Similarity:122/302 - (40%) Gaps:106/302 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFMGCC 72
            :|:::|:.|.:..:.|:.::..|..:.  ||||..|.......:.||:|.:.|..:.:|:|.|..
 Worm    54 LKWLVFLLNSIVFLVGVGILALGVYLF--IKDFREVKLVDIILNPAILISIFGFSICVVSFFGFM 116

  Fly    73 GAIREN--------SCALTSYSVVMLVLLV-------------SQLALIIYVWVDHVQIQQSLEK 116
            ||:|:|        :|...||.:|:.|.||             |...|::|. |.:....::|.:
 Worm   117 GALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTDTTEGLSANWLLLYA-VKNYHTNRNLAE 180

  Fly   117 IVQTIWDQRKTDALLMDTLQRSFKCCGLN----GFADYGITY----------------PASCCD- 160
            |              ||.||.:.:|||::    |:.|:.::|                |.|||. 
 Worm   181 I--------------MDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRK 231

  Fly   161 ---SPSNGT------------C---ALTQ--------VMTRSSCLKAVDSFWDTNVSIIKYAGLG 199
               |.:.|:            |   |||:        :.|| .||:.:.:.::::.   .:.|..
 Worm   232 SVISEAAGSSNPLLPAMRSLECWQNALTKRPGDLEHDIYTR-GCLQPLRTLFESHA---VHVGAF 292

  Fly   200 VTAVELVAFIFACCLAN----------------QTRNSQRRQ 225
            | |:.:|....:.||.|                ..||.:||:
 Worm   293 V-ALLIVPVCISVCLTNILAKQVDHQRYLLEREARRNDRRRK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_523630.1 Tetraspanin 8..216 CDD:459767 64/275 (23%)
tsp-14NP_001367834.1 Tetraspanin 54..>193 CDD:459767 39/155 (25%)
tetraspanin_LEL 145..286 CDD:351888 32/156 (21%)

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