DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and Cd81

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_598416.1 Gene:Cd81 / 12520 MGIID:1096398 Length:236 Species:Mus musculus


Alignment Length:233 Identity:64/233 - (27%)
Similarity:108/233 - (46%) Gaps:28/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYVLFIFNILF-----VICGILLITFGSIMVSTIKDFSGVGETFTANS--VAIIILV-LGCVVF 64
            :||:||:||.:|     ||.|:.|........:::. :..:|.....|:  |.|.||: :|.|:.
Mouse    10 IKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLL-YLELGNKPAPNTFYVGIYILIAVGAVMM 73

  Fly    65 LVAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALIIYVWVDHVQIQQSLEKIVQTIWDQRKTDA 129
            .|.|:||.|||:|:.|.|.::...:::|...::|..|:.:|:..||    .|.|:..:||....|
Mouse    74 FVGFLGCYGAIQESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQI----AKDVKQFYDQALQQA 134

  Fly   130 LLMD----------TLQRSFKCCGLNGFADYGIT-YPASCCDSPSNGTCALTQVMTRSSCLKAVD 183
            ::.|          |...:..|||.|.......| ...|.|  ||.|. .||.:: :..|.:.:|
Mouse   135 VMDDDANNAKAVVKTFHETLNCCGSNALTTLTTTILRNSLC--PSGGN-ILTPLL-QQDCHQKID 195

  Fly   184 SFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRNS 221
            ..:...:.:|..|.:.|..:.:...|.:..|....|||
Mouse   196 ELFSGKLYLIGIAAIVVAVIMIFEMILSMVLCCGIRNS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 61/227 (27%)
tetraspanin_LEL 104..189 CDD:239401 24/95 (25%)
Cd81NP_598416.1 Tetraspannin 9..230 CDD:278750 61/228 (27%)
CD81_like_LEL 113..202 CDD:239404 24/96 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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