DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ed and Cd63

DIOPT Version :9

Sequence 1:NP_001286152.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001036045.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus


Alignment Length:234 Identity:66/234 - (28%)
Similarity:125/234 - (53%) Gaps:21/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDCGGVFVKYVLFIFNILFVICGILLITFGSIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFL 65
            |.|    ||::|::..:.|..|.:.||..| :.|..:...:...||...:.:.::|:.:|..:||
Mouse     7 MKC----VKFLLYVLLLAFCACAVGLIAIG-VAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFL 66

  Fly    66 VAFMGCCGAIRENSCALTSYSVVMLVLLVSQLALII--YVWVDHV--QIQQSLEKIVQTIWDQRK 126
            |||:|||||.:||.|.:.::::.:.::::.::|:.|  ||:.|.|  :..:|.::.:|......|
Mouse    67 VAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFNKSFQQQMQNYLKDNK 131

  Fly   127 TDALLMDTLQRSFKCCGLNGFADY----GIT---YPASCCDSPSNGTCA---LTQVMTRSSCLKA 181
            | |.::|.||:...|||.:.:.|:    |:.   .|.|||.:.:.| |.   ....:....|::.
Mouse   132 T-ATILDKLQKENNCCGASNYTDWENIPGMAKDRVPDSCCINITVG-CGNDFKESTIHTQGCVET 194

  Fly   182 VDSFWDTNVSIIKYAGLGVTAVELVAFIFACCLANQTRN 220
            :..:...|:.::..|.||:..||::..||:|||....|:
Mouse   195 IAIWLRKNILLVAAAALGIAFVEVLGIIFSCCLVKSIRS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EdNP_001286152.1 Tetraspannin 8..217 CDD:278750 63/222 (28%)
tetraspanin_LEL 104..189 CDD:239401 22/96 (23%)
Cd63NP_001036045.1 Tetraspannin 10..227 CDD:395265 61/219 (28%)
CD63_LEL 105..203 CDD:239419 24/99 (24%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 66/234 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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