DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and CD53

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_000551.1 Gene:CD53 / 963 HGNCID:1686 Length:219 Species:Homo sapiens


Alignment Length:238 Identity:51/238 - (21%)
Similarity:98/238 - (41%) Gaps:44/238 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSFFGC 71
            ::.::|:..|::|.|.|..::..|..:|.. :.|.|........|:.....::|.:|.||:|.||
Human     8 LLKYVLFFFNLLFWICGCCILGFGIYLLIH-NNFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGC 71

  Fly    72 YGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFV-----NRSAFLG--------DMSNLVNLLWD 123
            .|..:::.|:..::..::.::.:.::.|...:||     |.....|        ...|.....||
Human    72 MGSIKENKCLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGLTDSIHRYHSDNSTKAAWD 136

  Fly   124 SHDYTAMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRPGCSAKFEEF 188
            |        ::....|||....:::.:   ..|.:|..  ||:.           .||.||...:
Human   137 S--------IQSFLQCCGINGTSDWTS---GPPASCPS--DRKV-----------EGCYAKARLW 177

  Fly   189 WNDNMDIIRWSGLGLCIFDLVVFLIAGALT-NCM---RSQNAG 227
            ::.|...|  ..:.:|:..:.|..::.||| ||.   .||..|
Human   178 FHSNFLYI--GIITICVCVIEVLGMSFALTLNCQIDKTSQTIG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 46/224 (21%)
tetraspanin_LEL <137..192 CDD:351888 11/54 (20%)
CD53NP_000551.1 Tetraspanin 9..208 CDD:459767 46/225 (20%)
CD53_like_LEL 104..186 CDD:239417 21/107 (20%)

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