DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ec and Tsp42Ea

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:227 Identity:78/227 - (34%)
Similarity:125/227 - (55%) Gaps:12/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFV 65
            |.|...:|.:||:|.|::..|.||||||.|:::.|.:...|..........:|:.:.:||.:|.:
  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILL 65

  Fly    66 VSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLVNLLWDSH----D 126
            :|:|||.|..|:|.||:..|:.::|||.|.||.|..:::|.:..:|..|.::|...|:..    |
  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRSD 130

  Fly   127 YTAMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRPGCSAKFEEFWND 191
            |  |..::.:..|||.:.||:|...| ..|.:||...:   .|...:||  |.||...|.|||:.
  Fly   131 Y--MDAIQISMKCCGRSGYTDYAYQG-KFPPSCCSDTN---NCRWETVY--RRGCKVTFVEFWDR 187

  Fly   192 NMDIIRWSGLGLCIFDLVVFLIAGALTNCMRS 223
            |.|||:::||.:...:.|.|:.|..|.|.:|:
  Fly   188 NSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 74/214 (35%)
tetraspanin_LEL <137..192 CDD:351888 20/54 (37%)
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 74/214 (35%)

Return to query results.
Submit another query.