DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and Tsp42Ea

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:227 Identity:78/227 - (34%)
Similarity:125/227 - (55%) Gaps:12/227 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFV 65
            |.|...:|.:||:|.|::..|.||||||.|:::.|.:...|..........:|:.:.:||.:|.:
  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILL 65

  Fly    66 VSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLVNLLWDSH----D 126
            :|:|||.|..|:|.||:..|:.::|||.|.||.|..:::|.:..:|..|.::|...|:..    |
  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRSD 130

  Fly   127 YTAMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRPGCSAKFEEFWND 191
            |  |..::.:..|||.:.||:|...| ..|.:||...:   .|...:||  |.||...|.|||:.
  Fly   131 Y--MDAIQISMKCCGRSGYTDYAYQG-KFPPSCCSDTN---NCRWETVY--RRGCKVTFVEFWDR 187

  Fly   192 NMDIIRWSGLGLCIFDLVVFLIAGALTNCMRS 223
            |.|||:::||.:...:.|.|:.|..|.|.:|:
  Fly   188 NSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 75/217 (35%)
tetraspanin_LEL 104..193 CDD:239401 28/92 (30%)
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 75/216 (35%)
tetraspanin_LEL 104..188 CDD:239401 28/91 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467677
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1406905at2759
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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