DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and cd81a

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:243 Identity:52/243 - (21%)
Similarity:109/243 - (44%) Gaps:34/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GCLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDL---SRFDVAGSGTD-PNTIPICVTVL--- 59
            || :..:.::|:..|.:|.:.|.:::.:...:..|.   |..|:...||: |.|..|.|.:|   
Zfish     7 GC-TKCIKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAV 70

  Fly    60 GGLIFVVSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLVNLLWD- 123
            |.::..|.|.||||..::|.|:.|.:.:.:.:||..::....|.|:|:.....::....:.::| 
Zfish    71 GAVMMFVGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKISKEVIGFYDSVYDK 135

  Fly   124 --------SHDYTA-MGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRP 179
                    .:..|| :.|..||..|||.      .|:..::       :||..|...|...::..
Zfish   136 GATYNTDNKNPATAVLKVFHETLQCCGK------GNLFTAI-------VDRWLTDTCPEHLRTNA 187

  Fly   180 -GCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCMRSQNA 226
             .|..:.:..:.|.:.:|..:.|.:.:  :::|.:..::..|...:|:
Zfish   188 VDCHTEIKNLFTDKISLIGIAALVVAV--IMIFEMIFSMVLCCGIRNS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 48/231 (21%)
tetraspanin_LEL 104..193 CDD:239401 18/99 (18%)
cd81aNP_571593.2 Tetraspannin 11..230 CDD:278750 49/233 (21%)
CD81_like_LEL 115..202 CDD:239404 18/99 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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