DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and Tspan5

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:267 Identity:62/267 - (23%)
Similarity:115/267 - (43%) Gaps:68/267 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVNFILYIVNIVFLIVGILLI----VLGSI-MLSDLSRFDVAGSGTDPNTIPICV-TVLGGLIFV 65
            :|....:.:.|.||.:|:...    ||.:| .::||..||           |:.: .|:||::|:
Mouse    64 LVRIHSHFLGITFLGIGLWAWNEKGVLSNISSITDLGGFD-----------PVWLFLVVGGVMFI 117

  Fly    66 VSFFGCYGIFRQSVCMTGAYTSMVFVLFILQL-------VLTCWV------FVNRS--AFLGDMS 115
            :.|.||.|..|::..:...::..:.::|.|:|       |...|:      |:|.:  |:..|: 
Mouse   118 LGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDI- 181

  Fly   116 NLVNLLWDSHDYTAMGVLEETFGCCGDTSYTNYN-NIGLS------------VPGTCCGYLDRQA 167
            :|.||:    |:|     :|.:.|||.....::| ||..:            ||.:||.....:.
Mouse   182 DLQNLI----DFT-----QEYWQCCGAFGADDWNLNIYFNCTDSNASRERCGVPFSCCTKDPAED 237

  Fly   168 TCNTPSVYQSR-------------PGCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTN 219
            ..||...|.:|             .||..:||::..||:.|:....:|:.:..:....:|..|.:
Mouse   238 VINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVS 302

  Fly   220 CMRSQNA 226
            .:.:..|
Mouse   303 DIEAVRA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 61/257 (24%)
tetraspanin_LEL <137..192 CDD:351888 18/80 (23%)
Tspan5XP_006501799.1 Tetraspanin 72..301 CDD:459767 59/249 (24%)
TM4SF9_like_LEL 156..276 CDD:239412 31/129 (24%)

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