DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and zgc:110329

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001017802.1 Gene:zgc:110329 / 550500 ZFINID:ZDB-GENE-050417-334 Length:346 Species:Danio rerio


Alignment Length:255 Identity:53/255 - (20%)
Similarity:103/255 - (40%) Gaps:60/255 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTI------PICVTVLGGLI-FV 65
            :.|.|.:.:::|.::|:.::.:|  :.:::.|       ....|:      |..|.:|.||: |.
Zfish    17 LKFSLNVYSMLFSLLGLYVLCIG--VYAEVER-------QKNRTLEGVFLAPAVVLILLGLVMFT 72

  Fly    66 VSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLV--LTCWVFVNRS--AFLGDMSNLVNLLWDSHD 126
            ||..|..|..|.:..:...:..::.||..||.:  :...:|...:  .|...:...:...:|..|
Zfish    73 VSVIGMVGSLRDNKTLLHMFLCVLCVLLALQAIALIIALIFEKTTIKLFQNSIREGIKHYYDDLD 137

  Fly   127 Y-TAMGVLEETFGCCGDTSYTNY-----------NNIGLSVPGTCCGYLDRQAT-------CNTP 172
            : ..:..::|.|.|||...|.::           :.:...||.|||   .||:.       |...
Zfish   138 FKNILDYVQEKFSCCGGDEYKDWEVNQYHLCDGKSPLACGVPYTCC---IRQSVGEVVNTLCGYK 199

  Fly   173 SVYQSRP---------GCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFL--IAGALTNCM 221
            :::|.|.         ||......:..||:.    :.:|:|   ..|.|  :.|.|.:|:
Zfish   200 TLHQQREALDGVIHVRGCIHAVNLWMGDNIG----ATIGIC---CAVGLPQLLGILLSCV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 52/251 (21%)
tetraspanin_LEL <137..192 CDD:351888 17/81 (21%)
zgc:110329NP_001017802.1 Tetraspanin 17..255 CDD:459767 53/255 (21%)
penumbra_like_LEL 111..229 CDD:239411 23/120 (19%)

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