DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and tspan14

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:266 Identity:65/266 - (24%)
Similarity:112/266 - (42%) Gaps:63/266 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FILYIVNIVFLIVGILLIVLG------SIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSF 68
            ::|:..||:|.:.|::|:.:|      ..:|||:::. ....|.||..:   |.|:|.::|.:.|
 Frog    17 YLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKV-TRLHGFDPVWL---VLVVGVIMFTLGF 77

  Fly    69 FGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTC-------WV-------FVNRSAFLGDMSNLVN 119
            .||.|..|:::|:...:...:.::|.::|.:..       ||       |.|......|..:|.|
 Frog    78 AGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFENNIKSYRDDIDLQN 142

  Fly   120 LLWDSHDYTAMGVLEETFGCCG-----DTSYTNYNNIGL--------SVPGTCCGYLDRQATCNT 171
            |: ||        |::...|||     |.....|.|..:        .||.:||.....|...||
 Frog   143 LI-DS--------LQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSCCVPDPAQTVVNT 198

  Fly   172 PSVYQSR-------------PGCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVF--LIAGALTNCM 221
            ...|.:|             .||.:..|.:...|:.|:  :|:.|.|..|.:|  .:|..|.:.:
 Frog   199 QCGYDARRKKPNERPNTTFSKGCISALEAWLPRNIYIV--AGVFLVISILQIFGIYLARTLMSDI 261

  Fly   222 RSQNAG 227
            .:..||
 Frog   262 EAVKAG 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 63/256 (25%)
tetraspanin_LEL <137..192 CDD:351888 18/80 (23%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 62/254 (24%)
TM4SF9_like_LEL 113..233 CDD:239412 29/128 (23%)

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