DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and Tsp33B

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster


Alignment Length:279 Identity:60/279 - (21%)
Similarity:92/279 - (32%) Gaps:124/279 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LYIVNIVFLIVGILLIVLGSI-------MLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSFF 69
            |:::.|...::|:|::|:.:.       .|||:.                |..|.|.|      |
  Fly    12 LHLLLITEAVIGLLILVVTAYYHTVLTGYLSDIE----------------CRLVYGYL------F 54

  Fly    70 GCYGIFRQSVCMTGAYTSMVFVLFI--------------LQLVLTCWVF----VNRSAFLGDMSN 116
            |.| :|       ||...:.|:..|              ::|:|:.|.|    :..|.| |.:.|
  Fly    55 GIY-VF-------GAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGF-GCVWN 110

  Fly   117 LV---------------------------NLLWDSHDYTAMGVLEETFGCCGDTSYTNY------ 148
            |.                           .||||.        |:....|||...|.::      
  Fly   111 LYRGVDVLENAADTSLTRGIDMYYSCPEWKLLWDG--------LQWHKECCGVHGYKDWMNAEWM 167

  Fly   149 ----NNIGLSV--PGTCCGYLDRQATCNT------PSVYQSRPGCSAKFEEFWNDNMDIIRWSGL 201
                ||....|  |..||     :.:|::      ||..||..|.|.  :.|....:|.|..:| 
  Fly   168 PRRENNCTSMVLAPFACC-----KRSCDSCFNNFLPSEGQSIGGNSR--QPFPALTVDSINANG- 224

  Fly   202 GLCIFDLVVFLIAGALTNC 220
              |:...|     .|:.||
  Fly   225 --CLPAFV-----SAVWNC 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 60/279 (22%)
tetraspanin_LEL 104..193 CDD:239401 29/137 (21%)
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 58/271 (21%)
CD151_like_LEL 112..237 CDD:239408 31/148 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443008
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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