DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and Tsp29Fb

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001137809.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster


Alignment Length:253 Identity:66/253 - (26%)
Similarity:107/253 - (42%) Gaps:36/253 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SGI--VNFILYIVNIVFLIVGILLIVLGS---IMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIF 64
            ||:  ..::|.||:.:|.:..||||::|:   .:..|.|.| :.|..:.|   |..:..:|.::.
  Fly    10 SGMKCAKYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLF-IDGHFSSP---PALLIAIGFILI 70

  Fly    65 VVSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLVN--LLWDSHD- 126
            .|:..|.||..::||.:...|...:|::|||::......||.:|...|.:...:|  |....|| 
  Fly    71 AVAALGAYGAVKESVMVINLYGVCLFLVFILEVSAAIAAFVMQSQVRGMLIRTMNQALAEYEHDP 135

  Fly   127 YTAMGV--LEETFGCCG--------DTSYTNYN-NIGLS---VPGTCCGYL------DRQATCNT 171
            |...||  ::....|||        |....|.| .:|:.   ||.:|||..      ..|.||..
  Fly   136 YVESGVDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCCGNQPTSLNDSTQMTCME 200

  Fly   172 PSVYQSRPGCSAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCMRSQNAGRQ 229
            ...|    ||..|.....:.:..:|......:....|:..|.|..|...:|...:.|:
  Fly   201 TYDY----GCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRNKSIRE 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 62/241 (26%)
tetraspanin_LEL 104..193 CDD:239401 30/111 (27%)
Tsp29FbNP_001137809.1 Tetraspannin 14..246 CDD:278750 62/239 (26%)
tetraspanin_LEL 110..218 CDD:239401 30/111 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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