DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and cd63

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:245 Identity:59/245 - (24%)
Similarity:115/245 - (46%) Gaps:40/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDV--AGSGTDPNTIPICVTVLGGLIFVVSFFG 70
            |.::|:..|.:|.:.|:.|||||.::...|....:  ..||:     |:.:.|:|.:||.:||||
Zfish    10 VKYLLFFFNFIFWLCGLALIVLGILVHVSLHNTAILQGASGS-----PMVLIVVGVIIFFISFFG 69

  Fly    71 CYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFLGDMSNLVNLLWD--------SHDY 127
            |.|.::::.||...:..::.::.|.::......::    |.|.::.|::..::        :.:|
Zfish    70 CCGAWKENQCMVVTFAIILSLIVITEIGAGIAGYI----FRGKVNELLDQSFNTMIAGYNKTEEY 130

  Fly   128 -TAMGVLEETFGCCGDTS---YTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRP------GCS 182
             |.:..:::...|||..|   :.|::...:|||.:||    :..|.|......::|      ||.
Zfish   131 RTTLDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCC----KNVTKNCGIGAMTKPTVIYLEGCQ 191

  Fly   183 AKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCM--RSQNAGRQV 230
            ...|....:|   |.|..:|..:...|  .|.|.:..|:  |:..:|.:|
Zfish   192 PILETRIKEN---ILWIAVGALVIGFV--QITGIVLACILSRAIRSGYEV 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 55/232 (24%)
tetraspanin_LEL 104..193 CDD:239401 21/106 (20%)
cd63NP_955837.1 Tetraspannin 9..230 CDD:278750 57/237 (24%)
CD63_LEL 103..202 CDD:239419 22/109 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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