DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and tsp-7

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:235 Identity:54/235 - (22%)
Similarity:103/235 - (43%) Gaps:43/235 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVNFILYIVNIVFLIVGILLIVLGSIM-LSDLSRFDVAGSGTDPNTIPICVTVLGGLIFVVSFFG 70
            ||.::|::.|:|..:.|:.||::|||: |...:..|:.|.  :....||.:.|:|.|..::.|.|
 Worm     8 IVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGD--ERLATPILLLVIGSLCTLLGFLG 70

  Fly    71 CYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWV------FVNRSAF---LGDM----------SN 116
            |.|..|::.|:|.::.      .:|.|::||.:      :....:|   :|:.          |.
 Worm    71 CCGAIRENYCLTVSFA------VLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESR 129

  Fly   117 LVNLLWDSHDYTAMGVLEETFGCCGDTSYTNYNNIGLSVPGTCCGYLDRQATCNTPSVYQSRPGC 181
            .|...||.        ..:.|.|||.|:.:::... .::|.:||  ::....|...:.....|||
 Worm   130 GVESAWDK--------THQLFECCGVTNSSDWLTF-TTIPDSCC--IEEIEGCARENAPLFEPGC 183

  Fly   182 SAKFEEFWNDNMDIIRWSGLGLCIFDLVVFLIAGALTNCM 221
            ....|::...|..::.    |:|.....:.|:......|:
 Worm   184 IHSVEQWVLKNGAMVG----GICAVLAAIQLVGVCFACCL 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 53/233 (23%)
tetraspanin_LEL 104..193 CDD:239401 19/101 (19%)
tsp-7NP_492636.1 Tetraspannin 8..223 CDD:278750 54/235 (23%)
NET-5_like_LEL 104..195 CDD:239418 19/101 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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