DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and tsp-8

DIOPT Version :9

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:281 Identity:58/281 - (20%)
Similarity:103/281 - (36%) Gaps:66/281 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSGIVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGS------GTDPNTIPICVTVL 59
            ||.....:..:.::.|..|.:.|:::..||..:|     ||.|.|      .|.|.........|
 Worm     1 MGSCVNALRIVTFLFNFAFWLSGVVVFGLGIWLL-----FDPAASDFFALHSTHPGAFRYVGWFL 60

  Fly    60 ---GGLIFVVSFFGCYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVFVNRSAFL----GDMSNL 117
               |.:|.:|.:|||.|.::.:.|....:..::.:.|.|:|.....:|..:....    ..|.:.
 Worm    61 VGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDT 125

  Fly   118 VNLLWDSHD--YTAMGVLEETFGCCGDTSYTNY------------------------NNIGL--- 153
            :...:.|..  ..|...::|.|.|||..:||::                        :.||.   
 Worm   126 IRNRYSSETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGG 190

  Fly   154 -------SVPGTC------------CGYLDRQATCNTPSVYQSRPGCSAKFEEFWNDNMDIIRWS 199
                   .||.:|            ||....||..||.:.:.:..||:....|..:.::.:|...
 Worm   191 NKGTGYGRVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGV 255

  Fly   200 GLGLCIFDLVVFLIAGALTNC 220
            .:.|||..|:..:::..|..|
 Worm   256 CVVLCIVQLLGIVLSMTLCCC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspannin 7..221 CDD:278750 56/275 (20%)
tetraspanin_LEL 104..193 CDD:239401 25/140 (18%)
tsp-8NP_510445.1 Tetraspannin 8..276 CDD:278750 55/272 (20%)
Heme_Cu_Oxidase_I 13..>108 CDD:294196 24/99 (24%)
tetraspanin_LEL 108..243 CDD:239401 24/134 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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