DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and LOC1279854

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_319633.4 Gene:LOC1279854 / 1279854 VectorBaseID:AGAMI1_010575 Length:253 Species:Anopheles gambiae


Alignment Length:229 Identity:47/229 - (20%)
Similarity:95/229 - (41%) Gaps:20/229 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVNFILYIVNIVFLIVGILLIVLGSIMLSDLSRFDVAGSGTDPNTIPICVTVLGGLIFV-VSFFG 70
            ::.:::.::..:.:::.|:.||:|:::....:.:.|.............:.|  |::.| :|.||
Mosquito    10 MIKYLILMLTFMCVVIEIIQIVVGAVLHRLFATYTVFIDNDFVRATHFLIAV--GIVLVFLSIFG 72

  Fly    71 CYGIFRQSVCMTGAYTSMVFVLFILQLVLTCWVF--VNR-SAFLGDMSNLV--NLLWDSHDYTAM 130
            ..||..::|.|...|..|..::.||:::|....|  .|| .:.|....|:.  ....|.....:.
Mosquito    73 FAGIIFENVIMIFLYAGMFGLMVILEIILASAAFSMYNRVDSMLTRRMNIAIQKFFSDRFMRASF 137

  Fly   131 GVLEETFGCCGDTSYTNYNNI--GLSVPGTCCGYLDRQATCNTPSVYQSRPGCSAKFEEFWNDNM 193
            ..::....|||..||.::.|.  ...:|.:||..:|       ........||.|...:|.....
Mosquito   138 NHMQNEMNCCGIQSYADWANFHPERDLPNSCCRRVD-------DGCMPHERGCHAPMSDFIGSRT 195

  Fly   194 DIIRWSGLGLCIFD---LVVFLIAGALTNCMRSQ 224
            .:|....:.:.:|.   :|..:|.||..:..:.|
Mosquito   196 HMIATGTVIIIVFQVICIVTAIIMGARLSKYKQQ 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 46/221 (21%)
tetraspanin_LEL <137..192 CDD:351888 14/56 (25%)
LOC1279854XP_319633.4 None

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