DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ec and LOC1269304

DIOPT Version :10

Sequence 1:NP_523629.1 Gene:Tsp42Ec / 35612 FlyBaseID:FBgn0033124 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_307926.5 Gene:LOC1269304 / 1269304 VectorBaseID:AGAMI1_011308 Length:277 Species:Anopheles gambiae


Alignment Length:271 Identity:60/271 - (22%)
Similarity:104/271 - (38%) Gaps:76/271 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSGIVNFILYIVNIVFLIVGILLIVLGSIMLSD---------LSRF-DVAGSGTDPNTIPICVTV 58
            :|..|.::::::|.:|.:.|.|||.:|.....|         |..| |:.      ..:.:.:.:
Mosquito    14 VSSCVKYMIFLLNFIFWLFGGLLIGIGFYAFVDKWQATGLIKLETFYDIV------LNLSLVMII 72

  Fly    59 LGGLIFVVSFFGCYGIFRQSVCMTGAYTSMVFVLFI--LQLVLTCWVFVNR-SAFL--------- 111
            .|.::||||..||.|..|::.|:...|:..:.:.|:  :.:.:|.:||.:: :|.|         
Mosquito    73 AGAIVFVVSLAGCLGALRENTCLLKFYSLCLLIFFLCEMAIAITAFVFPHKVNAVLEESFTDKII 137

  Fly   112 ------GDMSNLVNLLWDSHDYTAMGVLEETFGCCG-------DTSYTNYNNIG------LSVPG 157
                  .|:.||::.            .::.|.|||       |.....|.|..      ..||.
Mosquito   138 TTYRDDPDLQNLIDF------------AQQEFHCCGLSNEGYLDWGKNEYFNCSSPSVEKCGVPY 190

  Fly   158 TC---------------CGYLDRQATCNTPSVYQSRPGCSAKFEEFWND-NMDIIRWSGLGLCIF 206
            :|               |||..:|.:....|......|| .:....|.: |:.:|....||..|.
Mosquito   191 SCCINATDISSGLVNIMCGYHIQQQSVAAASKKIWTNGC-IEIVRVWAERNLYVIAGIALGAAIS 254

  Fly   207 DLVVFLIAGAL 217
            .|.|..:|..|
Mosquito   255 QLFVIYLAKTL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EcNP_523629.1 Tetraspanin 8..219 CDD:459767 59/267 (22%)
tetraspanin_LEL <137..192 CDD:351888 18/83 (22%)
LOC1269304XP_307926.5 Tetraspanin 18..>161 CDD:459767 34/160 (21%)
penumbra_like_LEL 118..241 CDD:239411 25/135 (19%)

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