Sequence 1: | NP_995767.1 | Gene: | vimar / 35609 | FlyBaseID: | FBgn0022960 | Length: | 635 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491824.1 | Gene: | ima-2 / 172329 | WormBaseID: | WBGene00002073 | Length: | 531 | Species: | Caenorhabditis elegans |
Alignment Length: | 304 | Identity: | 61/304 - (20%) |
---|---|---|---|
Similarity: | 110/304 - (36%) | Gaps: | 91/304 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 LAECFLGLTKCDDTNVRKEAAKCIAEIT-----KSEVQRKKFTKRNIIAAFLECLRQVPTSDGSM 103
Fly 104 ELPIQICRALGNICYLNDEARDLILELEGDAVLLRLLDITTIEDVANAAQFIKVRGGLLSNYLLG 168
Fly 169 GEGLAKRAMELGVMKKLQGIIDIGASNVEQHEDLLLNTLP-LLSILTENVSDLNFDSSLNIQLSR 232
Fly 233 ILAASTNPDLAEM---------CLELLHYQAESDEVKLILAKDGLCETIYNL------------- 275
Fly 276 -----------LEKYKTLASTSEARALMKLACELIVLILTGDDS 308 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vimar | NP_995767.1 | ARM | 55..155 | CDD:237987 | 21/104 (20%) |
armadillo repeat | 77..118 | CDD:293788 | 9/40 (23%) | ||
armadillo repeat | 124..165 | CDD:293788 | 7/40 (18%) | ||
armadillo repeat | 318..343 | CDD:293788 | |||
ARM | 322..428 | CDD:237987 | |||
armadillo repeat | 351..391 | CDD:293788 | |||
armadillo repeat | 396..428 | CDD:293788 | |||
ima-2 | NP_491824.1 | SRP1 | 21..522 | CDD:227396 | 61/304 (20%) |
IBB | 21..103 | CDD:280005 | |||
ARM | 126..248 | CDD:237987 | |||
armadillo repeat | 128..159 | CDD:293788 | |||
armadillo repeat | 167..203 | CDD:293788 | |||
armadillo repeat | 209..246 | CDD:293788 | |||
ARM | 266..374 | CDD:237987 | 26/135 (19%) | ||
armadillo repeat | 296..331 | CDD:293788 | 10/44 (23%) | ||
armadillo repeat | 337..372 | CDD:293788 | 7/40 (18%) | ||
ARM | 338..454 | CDD:237987 | 31/156 (20%) | ||
armadillo repeat | 380..416 | CDD:293788 | 11/50 (22%) | ||
armadillo repeat | 423..454 | CDD:293788 | 8/38 (21%) | ||
Arm_3 | 470..517 | CDD:292804 | 8/45 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |