Protein Alignment vimar and rap1gds1

DIOPT Version :10

• Sequence 1: NP_995767.1
• Gene: vimar / 35609
• FlyBaseID: FBgn0022960
• Length: 635
• Species: Drosophila melanogaster
• Sequence 2: XP_002936785.2
• Gene: rap1gds1 / 100486041
• XenbaseID: XB-GENE-1004455
• Length: 607
• Species: Xenopus tropicalis
• Alignment Length: 657
• Identity: 199/657 - (30%)
• Similarity: 332/657 - (50%)
• Gaps: 91/657 - (13%)

  Fly     6 IDDLIEKLKTTSVSPANTTNLL-----CEISA-----TKDPKLFDKHELAECFLGLTKCDDTNVR 60
            ::|.:||||.|...  .|::.|     |.:.|     |:..:...:..:.:.|..:.. .:::..
 Frog     4 LNDALEKLKITGTE--CTSDKLDGCLDCLLQALGHNNTESSEKIQQSGILQLFASILN-SESSCS 65

  Fly    61 KEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSDGSMELPIQICRALGNICYLNDEARD 125
            .:.|..:|||.|:|:.|....:..:|...::.|.     ....|:.:|..||||||||.|.|.|.
 Frog    66 SKVAHIVAEIAKNELMRIPCVEAGLIPPLVQLLH-----SKDQEVLLQTGRALGNICYDNHEGRR 125

  Fly   126 LILELEGDA--VLLRLLDITTIEDVANAAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQGI 188
            .: :.||.|  |:..|..:.|:.| .::.:.:.|..|:|.||....:.|..:.:::||:..|..:
 Frog   126 AV-DQEGGAQIVVDHLRSMCTLTD-PSSEKLMTVFCGMLMNYSSENDSLQTQLIQMGVIPILVDL 188

  Fly   189 IDIGASNVEQHEDLLLNTLPLLSILTENVSDLNFDSSLNI--QLSRILAASTNPDLAEMCLELLH 251
            :.:.:.|....|..|:    ....|.|..|.....:|.|:  ::.::....|..:..|:..|:|.
 Frog   189 LGVHSQNTSLTEMCLV----AFGNLAELESSKEQFASTNVAEEIVKLFKKQTEHEKREIIFEVLA 249

  Fly   252 YQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEAR-ALMKLACELIVLILTGDDSMHYLY-- 313
            ..||:|.:|:.|.:.||.|.:.::::  :|:.|..:.. |.:|.:.:|:||:|.||:||..|:
 Frog   250 PLAENDAIKMQLVEAGLVECLLDVVQ--QTVNSEKDDDIAELKTSSDLMVLLLLGDESMQKLFEG 312

  Fly   314 -TTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHCIYFVEQQTMNKLLEVLAKNNGVKD-DV 376
             ...:.:.::.||.|.:..|...|.||:.||||.|.:||:.|:...:.|||::|.::  |:| :|
 Frog   313 GKGSVFQRVLSWLPSNNHQLQLAGALAIANFARNDGNCIHMVDSGIVQKLLDLLDRH--VEDGNV 375

  Fly   377 RLQHALLSALRNLVIPKPNKNAVIQAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQEKLALEL 441
            .:|||.|||||||.||..||..::.||:.:.:|..|....|||.|||||||||.:|.|.:.|.:|
 Frog   376 TVQHAALSALRNLAIPVVNKAKMLSAGVAEEVLKFLRSEMPPVQFKLLGTLRMLIDAQAEAADQL 440

  Fly   442 LKNKTLIEQLVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIADKIPLTQ 506
            .||:.|:|:||.|.::.|:|||.|||.||::.||:|   ||                      ::
 Frog   441 GKNEKLVERLVEWCEAKDHAGVMGESNRLLSALIRH---SK----------------------SK 480

  Fly   507 DYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSVVYLSQPSEAAQAQLLQDELVK 571
            |..|:     :...|.|:.:|:|.|::|::||||||:||.:::.:.|    :||:..|....||
 Frog   481 DVIRT-----IVQSGGVKHLVTMATSEHVIMQNEALVALGLIAALEL----QAAEHDLESARLV- 535

  Fly   572 CEVGKKLAELISKSSDTMTKEIVENLQNCVNLLKSSEQL------------VAHLEQHNINELLK 624
             ||..:|.     |.:....||..|....:..:..||.|            |:.|..|. |:.:.
 Frog   536 -EVLHRLL-----SDERSAPEIKYNSMVLICAVMGSEPLHKEVQKLAFLDVVSKLRSHE-NKTVA 593

  Fly   625 SIPILTE 631
            ....|||
 Frog   594 QQASLTE 600

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vimar	NP_995767.1	armadillo repeat	77..118	CDD:293788	11/40 (28%)
		armadillo repeat	124..165	CDD:293788	11/42 (26%)
		armadillo repeat	318..343	CDD:293788	7/24 (29%)
		armadillo repeat	351..391	CDD:293788	19/40 (48%)
		armadillo repeat	396..428	CDD:293788	14/31 (45%)
rap1gds1	XP_002936785.2	armadillo repeat	44..71	CDD:293788	2/27 (7%)
		PLN03200	53..>190	CDD:215629	39/144 (27%)
		Arm	86..117	CDD:425727	9/35 (26%)
		armadillo repeat	91..116	CDD:293788	8/29 (28%)
		armadillo repeat	124..167	CDD:293788	13/44 (30%)
		ARM	169..210	CDD:214547	7/44 (16%)
		armadillo repeat	319..343	CDD:293788	7/23 (30%)
		Arm	346..389	CDD:425727	20/44 (45%)
		armadillo repeat	351..390	CDD:293788	19/40 (48%)
		chemoreceptor_sensor	<361..442	CDD:444710	41/82 (50%)
		armadillo repeat	395..427	CDD:293788	14/31 (45%)
		Arm	479..519	CDD:425727	16/44 (36%)