DRSC/TRiP Functional Genomics Resources

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Protein Alignment vimar and si:dkey-191g9.5

DIOPT Version :9

Sequence 1:NP_995767.1 Gene:vimar / 35609 FlyBaseID:FBgn0022960 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_001921954.3 Gene:si:dkey-191g9.5 / 100148873 ZFINID:ZDB-GENE-090313-217 Length:560 Species:Danio rerio


Alignment Length:669 Identity:183/669 - (27%)
Similarity:299/669 - (44%) Gaps:153/669 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AEIDDLIEKLKTTSVSPANT-----------TNLLCEISATKDPKLFDKHELAECFLGLTKCDDT 57
            |:|:.|.|.||..|||....           .|||.|.......|:.....|......|.|  .:
Zfish     2 ADIESLSEALKGISVSTELVEEELKPHLDVLLNLLLEKKKGTAEKIVSSGVLPILTQVLRK--KS 64

  Fly    58 NVRKEAAKCIAEITKSEVQRKKFTKRNIIAAFLECLRQVPTSDGSMELPIQICRALGNICYLNDE 122
            .:..:....:||:.:....|:...:..::.|.:..|:. |..|..:...    ||:|.||:    
Zfish    65 PLTSQVTLLVAEMAREATVREHCIEAGLVTALVPLLKS-PDQDQLLHTG----RAIGRICF---- 120

  Fly   123 ARDLILELEGDAVLLRLLDITTIEDVANAAQFIKVRGGLLSNYLLGGEGLAKRAMELGVMKKLQG 187
                                      .||.|                   ..:.:|.||:.:|..
Zfish   121 --------------------------ENAVQ-------------------QTQLVENGVIPRLVA 140

  Fly   188 IIDIGASNVEQHEDLLLNTLPLLSILT--------ENVSDLNFDSSLNIQLSRILAASTNPDLAE 244
            |:.....|     |.|:|.. ||::..        |.:::::....|..||.|    :.:.:...
Zfish   141 IMQQYPEN-----DPLVNVC-LLALCNLADVDAAREALTEVDVAEVLTHQLKR----APDAERRH 195

  Fly   245 MCLELLHYQAESDEVKLILAKDGLCETIYNLLEKYKTLASTSEARAL--MKLACELIVLILTGDD 307
            :.||:|....|||.:||...:.|:.|.   |.|..:||...|:...|  :|:|..|||.:|.||:
Zfish   196 LILEVLGSLGESDALKLQFVESGVPEA---LSEMIRTLQGGSDTHDLCSIKVASNLIVTLLLGDE 257

  Fly   308 SMHYLY---TTPLLKNMVDWLDSTDIDLLTTGVLALGNFARTDSHCIYFVEQQTMNKLLEVLAKN 369
            ||...:   |..:.::::.||.|::.:|..:|.||:.||||.||:|:..:|...:.::|::| :.
Zfish   258 SMQKCFGEGTGMVYQDVLAWLQSSNTELQLSGALAIANFARNDSNCVKMLELGVVPRILDLL-EQ 321

  Fly   370 NGVKDDVRLQHALLSALRNLVIPKPNKNAVIQAGLVQTILPMLEIHQPPVVFKLLGTLRMTVDGQ 434
            :..:.||.:|||.|||||||.||..||..:::.|:.:.|..:|....|||.|||||||||.||||
Zfish   322 HVAEGDVSVQHAGLSALRNLAIPASNKVRMLEDGVTERIRKLLCSDMPPVQFKLLGTLRMMVDGQ 386

  Fly   435 EKLALELLKNKTLIEQLVHWSKSSDYAGVTGESLRLMAWLIKHAYLSKIAYALPRKGDAPAEQIA 499
            |:.|..|.|::.|:.:::.|.::.|:|||.||:.||:|.||:|:...::.:.: .|.|.      
Zfish   387 EEAASVLGKDEALLARVMEWCEAKDHAGVRGEANRLLAALIRHSRNPEVIHTV-IKADG------ 444

  Fly   500 DKIPLTQDYDRSSLSEFLANEGTVEAMVSMLTAQHLVMQNEALIALCILSVVYLSQPSEAAQ--- 561
                                   |:.::||.|::|::||||||:||.|.|.:.:    ||.|   
Zfish   445 -----------------------VQHLISMATSEHVIMQNEALVALAIASAIDI----EAVQEPF 482

  Fly   562 ---------AQLLQDELVKCEVG-KKLAELISKSSDTMTKEIVENLQNCVNLLKSSEQLVAHLEQ 616
                     .::|.|..|..||. ..|..:.|..:.|:.:|.:.:|    ||    ...::.|..
Zfish   483 RDADLLPTLQKMLDDPDVAVEVKFSALGLICSLVNSTILREQITSL----NL----RDTLSKLSN 539

  Fly   617 HNINELLKS----IPILTE 631
            |...:|.|.    :.:|:|
Zfish   540 HTSTKLAKQADTVMAVLSE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vimarNP_995767.1 ARM 55..155 CDD:237987 15/99 (15%)
armadillo repeat 77..118 CDD:293788 9/40 (23%)
armadillo repeat 124..165 CDD:293788 3/40 (8%)
armadillo repeat 318..343 CDD:293788 7/24 (29%)
ARM 322..428 CDD:237987 45/105 (43%)
armadillo repeat 351..391 CDD:293788 15/39 (38%)
armadillo repeat 396..428 CDD:293788 13/31 (42%)
si:dkey-191g9.5XP_001921954.3 ARM 45..163 CDD:237987 30/179 (17%)
armadillo repeat 88..118 CDD:293788 7/34 (21%)
armadillo repeat 126..163 CDD:293788 11/42 (26%)
ARM 274..383 CDD:237987 48/109 (44%)
armadillo repeat 304..343 CDD:293788 15/39 (38%)
armadillo repeat 349..380 CDD:293788 12/30 (40%)
ARM 439..558 CDD:237987 37/160 (23%)
armadillo repeat 439..470 CDD:293788 15/60 (25%)
armadillo repeat 478..516 CDD:293788 8/37 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595896
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4500
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I3963
OMA 1 1.010 - - QHG52358
OrthoDB 1 1.010 - - D257055at33208
OrthoFinder 1 1.000 - - FOG0004617
OrthoInspector 1 1.000 - - otm26259
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4845
SonicParanoid 1 1.000 - - X3822
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.900

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