DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6u1 and cyp3a4.2

DIOPT Version :10

Sequence 1:NP_610252.3 Gene:Cyp6u1 / 35608 FlyBaseID:FBgn0033121 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001015786.1 Gene:cyp3a4.2 / 548503 XenbaseID:XB-GENE-971750 Length:504 Species:Xenopus tropicalis


Alignment Length:512 Identity:137/512 - (26%)
Similarity:215/512 - (41%) Gaps:70/512 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLTALGALSVVYALVKFSLGYWKRRGILHEKPKFLWGNI----KGVVSGKRHAQDALQDIYTAYK 68
            ||.||..|.::|.:  :..||:|:.||....|....|..    ||:|............::..|.
 Frog    14 LLAALLVLILLYGI--WPYGYFKKMGIPGPTPLPFIGTFLEFRKGMVQFDTECFKKYGKMWGTYD 76

  Fly    69 GRAPFVGFYACLKPFILALDLKLVHQIIFTDAGHFTSRGLYSNPSGEPLSHNLLQLDGHKWRSLH 133
            ||.|.:   |.:.|.|:...|.......||:..:|...|        |....:...:..:|:.:.
 Frog    77 GRQPVL---AIMDPAIIKTILVKECYTNFTNRRNFGLNG--------PFESAITIAEDEQWKRIR 130

  Fly   134 AKSAEVFTPANMQKLL--------VRLSQISSRIQRDLGEKSLQTINISELVGAYNTDVMASMAF 190
            ...:..||...::::.        :.:..|...:::|      :.....:::|||:.||:.|.:|
 Frog   131 NVLSPTFTSGKLKEMFQIMKDYSDILVKNIQGYVEKD------EPCATKDVIGAYSMDVITSTSF 189

  Fly   191 GLVGQDNVEFAKWTRNYWAD---FRMWQ----------AYLALEFPLIARLLQ---YKSYAEPAT 239
            .:    |::    :.|..:|   ..|.:          ..|.:.||.:..:|:   .....:..|
 Frog   190 SV----NID----SLNKPSDPFVIHMKKLLKTGLLSPLLILVVIFPFLRPILEGLNLNFVPKDFT 246

  Fly   240 AYFQKVALSQLQLHRRRDRQPLQTFLQL-----------YSNAEKPLTDIEIAGQAFGFVLAGLG 293
            .:|.....|..:..::.|.......|||           .||..|.|||.||..|:..|::||..
 Frog   247 EFFMNAVTSFREKRKKGDHSGRVDLLQLMMDSRTTGGNDLSNKHKALTDAEIMAQSVIFIVAGYE 311

  Fly   294 PLNATLAFCLYELARQPEVQDRTRLEINKALEEHGGQVTPECLRELRYTKQVLNETLRLHTPHPF 358
            ..:..|::..|.||..|:||.|...||:..|.:.... |.:.|.::.|...|:.|||||..|...
 Frog   312 TTSTALSYLFYNLATHPDVQQRLHEEIDSFLPDKASP-TYDILMQMEYLDMVIQETLRLFPPAGR 375

  Fly   359 LLRRATKEFEVPGSVFVIAKGNNVLIPTAAIHMDPGIYENPQRFYPERFEEQARRSRPAAAFLPF 423
            |.|.:.:..|:.|  ..|.||...|||...:..||..:..|:.|.||||.::.|.:.....||||
 Frog   376 LERVSKQNVEING--VSIPKGIVTLIPAYVLQRDPEYWPEPEEFRPERFSKENRATHTPFTFLPF 438

  Fly   424 GDGLRGCIAARFAEQQLLVGLVALLRQHRYAPSAETSIPVEYDNRRLLLMPKSDIKL 480
            |||.|.||..|||...:.|.:|.||:.....|.|||.||:|:.... .|.||..|.|
 Frog   439 GDGPRNCIGLRFALLSMKVAIVTLLQNFSVRPCAETLIPMEFSTIG-FLQPKKPIVL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6u1NP_610252.3 CYP6-like 69..479 CDD:410679 118/444 (27%)
cyp3a4.2NP_001015786.1 CYP3A 67..495 CDD:410743 121/457 (26%)

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