DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6u1 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_001286149.1 Gene:Cyp6u1 / 35608 FlyBaseID:FBgn0033121 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:540 Identity:135/540 - (25%)
Similarity:230/540 - (42%) Gaps:91/540 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MHRTLLTALGALSVVYALVKFSLGYWKRRGILHEKPKFLWGNIKGVVSGKRHAQDALQDIYTAYK 68
            |..::|.|:.....|:....:...:|.|:||...:....:|.|....|.::.....|.|....| 
 Worm     1 MSLSILIAIALFIGVFTYYLWIWSFWMRKGIKGPRGLPFFGIINAFQSYEKPWILRLGDWTKEY- 64

  Fly    69 GRAPFVGFYACLKPFILALDLKLVHQIIFTDAGHFTSR---GLYSNPSGEPLSHNLLQLDGHKWR 130
              .|..||...::..::..|.:.||::......:|.:|   .|..:|..:|..| |:...||:|:
 Worm    65 --GPMYGFTDGVEKTLVVSDPEFVHEVFVKQFDNFYARKQNPLQGDPDKDPRIH-LVTSQGHRWK 126

  Fly   131 SLHAKSAEVFTPANMQKLLVRLSQISSRIQRDL--GEKSLQTINISELVGAYNTDVMASMAFGLV 193
            .|...::..|:..:::|:...:.:..:.:.|.|  |....:||:|.|....:..|::..:|.|..
 Worm   127 RLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDIIGKIAMGQS 191

  Fly   194 GQDNVEFAKWTRNYWADFRMWQAYLALEFPLIARLLQYKSYAEPATA-----YFQKVALSQ---- 249
            |....|      |.|.|      .:...|.....::.......|.|.     :|.||..:|    
 Worm   192 GSMMFE------NPWLD------KIRAIFNTRGNIIFIICGIVPFTGSIFRWFFSKVPTAQTVTS 244

  Fly   250 ------LQLHRRRDRQPL------------QTFLQLYSN-----------------------AEK 273
                  :.|.:|.:::..            |.|:.|:.:                       .:|
 Worm   245 LMHTLEIALTKRVEQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKNGFARSQIVKVDK 309

  Fly   274 PLTDIEIAGQAFGFVLAGLGPLNATLAFCLYELARQPEVQDRTRLEINKALEEHGGQVTPECLRE 338
            .||..||.||.|.|:|||......:|::..|.|||.||:|.:.:.|:::...:  .:||.:.|.:
 Worm   310 HLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPD--PEVTFDQLSK 372

  Fly   339 LRYTKQVLNETLRLHTPHPFLL--RRATKEFEVPGSVFVIAKGNNVLIPTAAIHMDPGIY-ENPQ 400
            |:|.:.|:.|||||: |...::  |:..|...|.|  ..|.:|.||...|..:|.||..: ||..
 Worm   373 LKYMECVIKETLRLY-PLASIVHNRKCMKSTTVLG--MKIEEGTNVQADTWTLHYDPKFWGENAN 434

  Fly   401 RFYPERFEEQARRSRPAAAFLPFGDGLRGCIAARFA--EQQLLVGLVALLRQHRYAPSAETSIPV 463
            .|.|||:|....::....|:||||.|.|.||..|.|  |:::|  |..:|:::....:.||.||:
 Worm   435 EFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKML--LAQILKKYSLETTFETHIPL 497

  Fly   464 EY--------DNRRLLLMPK 475
            :.        .|..|.|.|:
 Worm   498 KLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6u1NP_001286149.1 p450 38..475 CDD:299894 126/504 (25%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 124/501 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I2666
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

Return to query results.
Submit another query.