DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6u1 and Cyp3a62

DIOPT Version :9

Sequence 1:NP_001286149.1 Gene:Cyp6u1 / 35608 FlyBaseID:FBgn0033121 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:522 Identity:146/522 - (27%)
Similarity:244/522 - (46%) Gaps:64/522 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLMHRTLLTALGALSVVYALVKF----SLGYWKRRGILHEKPKFLWGNIKGVVSG----KRHAQ 57
            |||:....|.....|:.:..|:..    :.|.:|:.||...||....|||.....|    .||..
  Rat     1 MDLIPNISLETWMLLATILVLLYLYGTSTHGNFKKLGISGPKPLPFVGNILAYRHGFWEFDRHCH 65

  Fly    58 DALQDIYTAYKGRAPFVGFYACLKPFILAL-DLKLVHQIIFTDA-GHFTSRGLYSNPSGEPLSHN 120
            ....||:..|:||.|           |||: |..::..::..:. ..||:|..: .|:| .|...
  Rat    66 KKYGDIWGFYEGRQP-----------ILAITDPDIIKTVLVKECYSTFTNRRSF-GPAG-ILKKA 117

  Fly   121 LLQLDGHKWRSLHAKSAEVFTPANMQKLLVRLSQISSRIQRDL---GEKSLQTINISELVGAYNT 182
            :...:..:|:.|....:..||...::::...::|.:..:.:::   .||. ..|.:.::.|||:.
  Rat   118 ITLSEDEEWKRLRTLLSPTFTSGKLKEMFPIINQYADLLVKNVKHEAEKG-NPITMKDIFGAYSM 181

  Fly   183 DVMASMAFGLVGQDNVEFAKWTRNYWAD-------FRMWQAYL--ALEFPLIARLLQYKSYAEPA 238
            ||:...:||:    ||:.....:|.:..       |.....:.  .:.||.:..:.:    |...
  Rat   182 DVITGTSFGV----NVDSLNNPQNPFVQKVKKLLKFNFLDPFFLSVILFPFLTPVFE----AFDI 238

  Fly   239 TAY------FQKVALSQLQLHRRRD--RQPLQTFLQLYSNAE--------KPLTDIEIAGQAFGF 287
            |.:      |.:.::.:::.:|.::  :|.|. ||||..|::        :.|||:||..|:..|
  Rat   239 TVFPKDVMKFFRTSVERMKENRMQEKVKQRLD-FLQLMINSQSSGDKESHQGLTDVEIVAQSIFF 302

  Fly   288 VLAGLGPLNATLAFCLYELARQPEVQDRTRLEINKALEEHGGQVTPECLRELRYTKQVLNETLRL 352
            :.||....::.|:|.||.||..|::|.:.:.||:.|| .:...||.:.|.|:.|...||||||||
  Rat   303 IFAGYETTSSALSFALYLLATHPDLQKKLQDEIDAAL-PNKAPVTYDVLVEMEYLDMVLNETLRL 366

  Fly   353 HTPHPFLLRRATKEFEVPGSVFVIAKGNNVLIPTAAIHMDPGIYENPQRFYPERFEEQARRSRPA 417
            ......|.|...|:.|:.| || |.||..|::||.|:|.||..:..|:.|.||||.::.:.|...
  Rat   367 FPVGGRLERVCKKDVEING-VF-IPKGTVVMVPTFALHKDPKCWPEPEEFCPERFRKKNQDSINP 429

  Fly   418 AAFLPFGDGLRGCIAARFAEQQLLVGLVALLRQHRYAPSAETSIPVEYDNRRLLLMPKSDIKLSV 482
            ..:||||:|.|.||..|||...:.:.||.:|:...:....||.||::...:......|..|..:|
  Rat   430 YIYLPFGNGPRNCIGMRFALMNMKIALVRVLQNFSFGLCKETQIPLKLRKKGFFQPEKPIILRAV 494

  Fly   483 ER 484
            .|
  Rat   495 SR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6u1NP_001286149.1 p450 38..475 CDD:299894 132/470 (28%)
Cyp3a62NP_001019403.1 p450 39..491 CDD:278495 133/477 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

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