DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3358 and crn-2

DIOPT Version :10

Sequence 1:NP_610248.4 Gene:CG3358 / 35604 FlyBaseID:FBgn0033117 Length:291 Species:Drosophila melanogaster
Sequence 2:NP_504476.1 Gene:crn-2 / 178945 WormBaseID:WBGene00000795 Length:286 Species:Caenorhabditis elegans


Alignment Length:297 Identity:94/297 - (31%)
Similarity:150/297 - (50%) Gaps:48/297 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASK-DERIYTTVGTHPTRCEEFVPD 71
            |...::.||:.||:||.|.||.|::||....|...|..:|..| ...:|.|.|.||...:::   
 Worm    14 GHPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADLVEKYPGFLYFTAGVHPHDAKDW--- 75

  Fly    72 PEGYYDQLRSRIKANRTKVRAVGECGLDYDRLHFCAQETQRLYFEKQLDLAAEFKLPLFLHMRNA 136
            .:|..:.|: :::.|.:.| ||||||||::| :|..|:.|:..|.||:|:|.:.:.|||:|.|.|
 Worm    76 NDGTLEALK-KLQENPSCV-AVGECGLDFNR-NFSPQDVQKEVFAKQVDMAVKLQKPLFIHEREA 137

  Fly   137 AEDFMGILERNRNKIEECGGGVVHSFTGTLEEAQRILAFGGLYIGFNGCSLKTDENAEVVR---- 197
            .||.:.||......:..   .|:|.||||:.||::.|.. |.|||..|...| |.:...|:    
 Worm   138 HEDMVKILTAAGPSLPP---AVIHCFTGTVVEAKKYLEM-GFYIGLTGFLWK-DRSDNGVQAGLR 197

  Fly   198 --KLPNDRIMLETDCPWCGIRPSHAGHKHVTTKFPTVK-KKEKWTAESLID------------GR 247
              ::|.::::||||.|:               .:|.:. ||.....:|||.            .|
 Worm   198 SGEIPIEKLVLETDAPY---------------MYPKINDKKIPKEIKSLITPETEALHNFSSFNR 247

  Fly   248 CEPCQISQVLESIAGIK-QEPKEQLAALYYQNTLDLF 283
            .|||.::.|.|.:|... ::||| :|.:..:|...::
 Worm   248 NEPCSLAAVCELVAAFAGRDPKE-VAKITTENAKKVY 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3358NP_610248.4 TatD_DNAse 13..284 CDD:238635 93/292 (32%)
crn-2NP_504476.1 TatD_DNAse 6..284 CDD:238635 94/297 (32%)

Return to query results.
Submit another query.