DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and SRP2

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:382 Identity:105/382 - (27%)
Similarity:175/382 - (45%) Gaps:53/382 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 QLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLDQLLAK 102
            ::...:||:.   |.||||:||...|.:.....:..|.....|.. |: :..||....:...||.
plant    48 KVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFILSF-LK-SSSTEETNAIFHELAS 107

  Fly   103 GQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAK-HINSWV 166
            ..::..| :...||:...|.:::.|.......::||....|.|:...|:|..||:..: .:|:|.
plant   108 VVFKDGS-ETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWA 171

  Fly   167 EEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTM-SQ 230
            ...|:..||:::...|:.:.|:.|..||:|||..|:.:|....|....|....|:.|||..| |.
plant   172 SRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFMRSY 236

  Fly   231 EDYFRFGELTELKA----KVVELPY------TGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEIS 285
            |..|       ::|    ||:.|||      |..:....:.||.::..|..:.|::.. :...:.
plant   237 EKQF-------IEAYDGFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERITS-NPGFLD 293

  Fly   286 SQLRRRKVRV---QLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAI 347
            |.:...:|.|   ::||||.||                   |...||::...| |.:| :..||:
plant   294 SHIPEYRVDVGDFRIPKFKIEF-------------------GFEASSVFNDFE-LNVS-LHQKAL 337

  Fly   348 IEVNEKGTTASGATFIKVSVES-LTIGEEVFEFIADHPFFFAIKDAQ--NTLFLGHV 401
            ||::|:||.|:.||.:.|...| |...::..:|:|||||.|.|::.:  ..||.|.:
plant   338 IEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFAGQI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 105/380 (28%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 105/382 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

Return to query results.
Submit another query.