DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and serpind1

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001015716.1 Gene:serpind1 / 548433 XenbaseID:XB-GENE-6085731 Length:484 Species:Xenopus tropicalis


Alignment Length:386 Identity:104/386 - (26%)
Similarity:179/386 - (46%) Gaps:39/386 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQFASQLFGQLA-KSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLG----LEGAGKTE- 91
            |.|...|:..:. .:.:..||:.:|..|.|.:|...||.:|...|::...||    :..:.|.| 
 Frog   117 ANFGFNLYRAIKNNTDASDNILLAPVGISTAMATISLGTKGQALDQVLFTLGFKNFINASSKYEI 181

  Fly    92 -----VAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVN 151
                 |..||...|.:..:...        |:..|.|:|.:.|.:.:.:::.:...:.|.|:.|:
 Frog   182 LTLHNVFRKLTHRLFRRNFGYT--------LRSVNDIYVKKDFVIREPFKNNLKNYYFAEAQMVD 238

  Fly   152 FTQKADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFV 216
            |..| |.....|..:::.|...||:.:.  ::|.....:|||.||||..|::.||...|...:|.
 Frog   239 FGSK-DFLTKANKRIQQLTKGLIKEALT--NVDPALLMLLVNCIYFKGTWENKFPVEYTQNMNFR 300

  Fly   217 NHGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDL 281
            .:....|.|..|..:..|......||...|::|||.| :|..||:||.:..|:.::|:::....:
 Frog   301 LNEKELVKVPMMKTKGNFLVAADPELDCAVLQLPYVG-NISMLIVLPHKLSGMKLLEKQISPQVV 364

  Fly   282 NEISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKA 346
            ....:.:..|...|.||:||.|....||..|..:|:..||:.| :.|.:  ..:.:.|...:|:.
 Frog   365 ERWQNIMTNRTREVFLPRFKLEKSYNLQEVLSNMGVTDLFTHG-DFSGV--SDKNMNIGLFQHQG 426

  Fly   347 IIEVNEKGTTASGAT---FIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNT--LFLGHVS 402
            .|.|||:||.|:..|   |:.:|.::        .|:||.||.|.|.:.:..  :|:|.|:
 Frog   427 TITVNEEGTEAAAVTVVGFMPLSTQA--------RFVADRPFLFLIYEHRTNCLIFMGRVA 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 103/383 (27%)
serpind1NP_001015716.1 serpinD1_HCF2 38..484 CDD:381004 104/386 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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