DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and Spn42Dd

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:368 Identity:148/368 - (40%)
Similarity:217/368 - (58%) Gaps:14/368 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLDQ 98
            |.:.:::..|:||.:.:|:|.||.||.|.|::.::|||||||.||:..|||....|..||.:...
  Fly    16 QTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLPSEDKEAVAARYGA 80

  Fly    99 LLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHIN 163
            ||     ....|.|:.|.||.||||:|..::.|.|.|...|.:.|.:.||:::.|.....|:.||
  Fly    81 LL-----NDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVAAERIN 140

  Fly   164 SWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTM 228
            .||.:||..:||.:|.|.|:.:|..|:||||||||..|:|.|....|.||.|.....:.|.|..|
  Fly   141 QWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSVPVQMM 205

  Fly   229 SQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLRRRKV 293
            :|...||.....:|.|:|:||||..:::...|.||:|.:||:.:|||::|     .:..|..::|
  Fly   206 AQMGTFRANYFRDLDAQVIELPYLNSNLSMTIFLPREVEGLSALEEKIVG-----FARPLVAKEV 265

  Fly   294 RVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGTTAS 358
            .::|||||.||...|:..||:|||::||:..::||.|:......::|:|.|||.:||||:|..|:
  Fly   266 YLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGKVSQVSHKAFLEVNEEGAEAA 330

  Fly   359 GATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNTLFLGHV 401
            |||.:.|:..:   |...| .:|||||.|.|:||....|.|.|
  Fly   331 GATSVAVTNRA---GFSTF-LMADHPFAFVIRDANTIYFQGRV 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 148/368 (40%)
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 148/368 (40%)

Return to query results.
Submit another query.