DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and Serpinb1c

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:405 Identity:138/405 - (34%)
Similarity:204/405 - (50%) Gaps:56/405 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAMANTLNYSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLG 81
            |:.||.|           ||.:||..|.:|....|.:|||.||.:.||:.||||.||||.:|...
Mouse    37 LSSANNL-----------FALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKT 90

  Fly    82 LGLEGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAA 146
            |..:.|  .::..:...|.|:.....||     ..||.|||::..:.:.....|...:.|.::|.
Mouse    91 LHFDSA--EDIHSQFQSLTAEVSKRGAS-----HTLKLANRLYGEKTYNFLPEYLASIQKTYSAD 148

  Fly   147 AENVNFTQKA-DTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYAT 210
            ...|:|...: |..|.||.||:.||.::|::|.|...:|:.|..:||||.|||..||..|  .|.
Mouse   149 LALVDFQHASEDARKEINQWVKGQTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKF--MAR 211

  Fly   211 YASDFVNHGGRKV--SVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVE 273
            ..:|......:||  :|..|..::...||.:.:||.||:|:||.|.::..:|:||::      :|
Mouse   212 DTTDAPFRLSKKVTKTVKMMYLKNNLPFGYIPDLKCKVLEMPYQGGELSMVILLPED------IE 270

  Fly   274 EKLMGIDLNEISSQLRRRKVR-----------VQLPKFKFEFDVPLQAALEELGIKKLFSPG-AN 326
            ::..|  |.||..||...|::           |:|||||.|....|.:.|.:||::.|||.. |:
Mouse   271 DETTG--LEEIEKQLTLEKLQECENLQNIDVCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKAD 333

  Fly   327 LSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGA---TFIKVSVESLTIGEEVFEFIADHPFFFA 388
            ||.: .||..|.||::.||:.:||||:||....|   |.:...:..:       ||..||||.|.
Mouse   334 LSGM-SGSRDLFISKIVHKSYVEVNEEGTETDAAMPGTVVGCCLMPM-------EFTVDHPFLFF 390

  Fly   389 IK--DAQNTLFLGHV 401
            |:  ...:.||||.|
Mouse   391 IRHNPTAHVLFLGRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 133/389 (34%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 138/405 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.830

Return to query results.
Submit another query.