DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinb6b

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:396 Identity:128/396 - (32%)
Similarity:209/396 - (52%) Gaps:34/396 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PAGEAQ--FASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLE---GAG 88
            |..||.  ||..|...|.: .|.:|::|||.||.:|||:.::||:|:||.::...|.|:   |.|
  Rat     3 PLLEANGTFAFNLLKTLGE-DSSKNVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDKCSGRG 66

  Fly    89 KTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFT 153
            ..:|.:....||||   ...:|.:.:  ||.|||:|..:.|.:..:::|...|.:.|..|.::|.
  Rat    67 SRDVHQGFQSLLAK---VNKTGTQYL--LKTANRLFGEKTFDILASFKDACRKFYEAEMEELDFK 126

  Fly   154 QKADTAK-HINSWVEEQTHQQ-----------IKDLIAPESLDADTSAILVNAIYFKADWQSSFP 206
            ...:.:: |||:||.::|..|           |.:|::..|::|:|..:||||||||.:|:..|.
  Rat   127 GAPEQSRQHINTWVAKKTEGQSISLNWNSQKKITELLSSGSVNANTPLVLVNAIYFKGNWKKQFN 191

  Fly   207 DYATYASDFVNHGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAI 271
            ...|....|......:..|..|.::..|:...:.|:...::.|||.|.::..:|:||.|...|.:
  Rat   192 KEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNMIIMLPDEHIELRM 256

  Fly   272 VEEKLMGIDLNEISS--QLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG-ANLSSLYQG 333
            ||:::......|.:|  ::..|:|.|.|||||.|.:..::..|..||:...|..| |:.|.: ..
  Rat   257 VEKEITYKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAFEQGMADFSGI-AS 320

  Fly   334 SEPLRISEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNT--L 396
            .|.|.:|:|.||:.:||||:||.|:.||...|:...:     |..|.|:|||.|.|:.::..  :
  Rat   321 KEGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCM-----VPYFCANHPFLFFIQHSRTNGIV 380

  Fly   397 FLGHVS 402
            |.|..|
  Rat   381 FCGRFS 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 126/391 (32%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 128/396 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.730

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