DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Spn28Da

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:371 Identity:127/371 - (34%)
Similarity:191/371 - (51%) Gaps:20/371 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLDQ 98
            ||..||:....:.....||:.||..:..|:::..:||:|:||:||:..|.|. ..|..||...|:
  Fly    16 QFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALNLP-EDKKNVATIYDK 79

  Fly    99 LLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHIN 163
            ||.|.:..|     .|..|..|||:||.:...:.:.|..||:|:|.|.||.:....:...|..||
  Fly    80 LLTKLERGK-----KVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLADRLKAAWAIN 139

  Fly   164 SWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTM 228
            .||.:||...:||:|.|..|..|.||:::||.:||..|::.|....|....|......:|:|:.|
  Fly   140 DWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSKSYQVNVNMM 204

  Fly   229 SQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVE---EKLMGIDLNEISSQLRR 290
            ||..  ||...|....:::|||:..:::..:|:||::...|...|   |....|.|.|:.     
  Fly   205 SQVG--RFKMRTSTIDQIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESYPQIVLTEMD----- 262

  Fly   291 RKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGT 355
              |.|||||||.:|.:.|...|:.:||:.||:..:::|.|...| ..|||:|.|||.||::|:|.
  Fly   263 --VHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQS-GTRISQVVHKAFIEIDEEGG 324

  Fly   356 TASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNTLFLGHV 401
            :|..|:...:...| .....|..|..:.||.|.|:|..|..|.|.|
  Fly   325 SAGSASASPIRGLS-DYATSVVTFTVNSPFVFMIRDDDNIYFRGRV 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 126/369 (34%)
Spn28DaNP_001036345.1 SERPIN 16..369 CDD:238101 126/369 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468710
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
109.900

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