DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinb1b

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:402 Identity:141/402 - (35%)
Similarity:208/402 - (51%) Gaps:45/402 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAMANTLNYSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTA-DELKL 80
            |:.||:|           ||.:||..|::|....|| |||.||.:.||:.:|||:||:| ..|:|
  Rat     4 LSSANSL-----------FALELFHTLSESSPTGNI-FSPFSISSALAMVFLGAKGSSAPSSLRL 56

  Fly    81 GLGLEGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAA 145
            ..........::..:...|.|:.:...||     ..||.|||::..:.:.....:.....|.:.|
  Rat    57 AETFHFDSVEDIHSRFQSLNAEMRKHGAS-----HTLKVANRLYGEKTYNFLPEFLASTQKMYGA 116

  Fly   146 AAENVNFTQKA-DTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYA 209
            ....|:|...: |..|.||.||:.||..:|.:|:|...:::.|..:||||||||..||..|....
  Rat   117 DLAPVDFQHASEDARKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRH 181

  Fly   210 TYASDF-VNHGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQ----EEQGL 269
            |..:.| :|....|: |..|.|::.|.||.:.:||.||:|:||.|.::..:|:||:    |..||
  Rat   182 TTDAPFRLNKKDTKM-VKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGL 245

  Fly   270 AIVEEKLMGIDLNEIS--SQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG-ANLSSLY 331
            ..:||:|....|.|.:  ..|:...|.|.|||||.|....|.:.|..||::.|||.. |:||.:.
  Rat   246 QKIEEQLTLEKLYEWTKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMS 310

  Fly   332 QGSEPLRISEVKHKAIIEVNEKGTTASGAT-----FIKVSVESLTIGEEVFEFIADHPFFFAIK- 390
            : |..:.||::.||:.:||||:||.|:.||     :..||:|:         ||.||||.|.|: 
  Rat   311 E-SRDIFISKIVHKSFVEVNEEGTEAAAATAGLVEYCLVSIEA---------FIVDHPFLFFIRH 365

  Fly   391 -DAQNTLFLGHV 401
             ...|.||.|.|
  Rat   366 NPTANMLFFGRV 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 136/386 (35%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 141/402 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

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