DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinc1

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:455 Identity:136/455 - (29%)
Similarity:221/455 - (48%) Gaps:74/455 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLLLLQGLNLAM------------------ANTLNYSKSPAGEA--------------------- 33
            ||||:..|..|:                  .|.:...:|||.:|                     
  Rat    20 SLLLIGALGCAVCHGNPVDDICIAKPRDIPVNPMCIYRSPAKKATEEDVLEQKVPEATNRRVWEL 84

  Fly    34 -----QFASQLFGQLAKSQSGR-NIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEV 92
                 :||:..:..||.|::.. ||..||.||.|..|:..|||..:|..:|     :|......:
  Rat    85 SKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQL-----MEVFKFDTI 144

  Fly    93 AEKL-DQL---LAK---GQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENV 150
            :||. ||:   .||   ..:.||:...:   |..|||:|..:.....::|||:....:.|..:.:
  Rat   145 SEKTSDQIHFFFAKLNCRLYRKANKSSN---LVSANRLFGDKSLTFNESYQDVSEIVYGAKLQPL 206

  Fly   151 NFTQKADTAK-HINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASD 214
            :|.:..:.:: .||:||..:|..:|||:|...::|..|:.:|||.||||..|:|.|....|....
  Rat   207 DFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEP 271

  Fly   215 FVNHGGRKVSVDTMSQEDYFRF---GELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKL 276
            |....|:...|..|.||..|::   ||.|:    |:|:|:.|.||..::|||:.|:.||.||::|
  Rat   272 FHKVDGQSCLVPMMYQEGKFKYRRVGEGTQ----VLEMPFKGDDITMVLILPKPEKSLAKVEQEL 332

  Fly   277 MGIDLNEISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANL--SSLYQGSEPLRI 339
            ....|.|...:|....:.|.:|:|:.|....|:..|:::|:..||||..:.  ..:.:|.:.|.:
  Rat   333 TPELLQEWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRDDLFV 397

  Fly   340 SEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKD-AQNT-LFLGHVS 402
            |:..|||.:||||:|:.|:.:|.:.::..||......|:  |:.||...|:: |.|| :|:|.||
  Rat   398 SDAFHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTFK--ANRPFLVLIREVALNTIIFMGRVS 460

  Fly   403  402
              Rat   461  460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 124/411 (30%)
Serpinc1NP_001012027.1 antithrombin-III_like 80..459 CDD:239000 123/392 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

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