DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinb13

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001100638.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:389 Species:Rattus norvegicus


Alignment Length:386 Identity:128/386 - (33%)
Similarity:197/386 - (51%) Gaps:27/386 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADEL-KLGLGLEGAGKTEV------ 92
            |...||.:|.|:..| |:.|||..|.|.:.:..||.:|:||.|| |:....:|.|.:.:      
  Rat    11 FLFDLFKELNKTSDG-NVFFSPLGISTAIGMILLGTQGATASELQKVLYSEQGTGSSRLKSEEKE 74

  Fly    93 AEKLDQLLAKGQWEKASGDEDVPKLKY----ANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFT 153
            .||.:::  ..|::|...:...|...|    :||::..:.:...|.|.|.|.|.:.|:.|.|:|.
  Rat    75 IEKTEEI--HHQFQKLLTEISKPTKDYDLIISNRLYGERTYLFLQKYIDYVEKYYHASLEPVDFV 137

  Fly   154 QKAD-TAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVN 217
            ..|| :.|.||||||.||::::|||....||::.|..:|:|.:|||..|...|....|...||..
  Rat   138 NAADESRKKINSWVESQTNEKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEEDFWL 202

  Fly   218 HGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLN 282
            :......|..|:|...|.|..|.:|:||:|.:||..:|....::||.:..||..:.:||....|.
  Rat   203 NKNISKPVQMMAQCSSFSFTLLEDLQAKIVGIPYKNSDFSMFVLLPNDIDGLEKIIDKLSPEKLV 267

  Fly   283 EISS--QLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLS--SLYQGSEPLRISEVK 343
            |.:|  ||::|||.::||:.|.|....||..||.:||...||..|:.|  |.:.|   |:.....
  Rat   268 EWTSPGQLKQRKVDLRLPRLKVEETYDLQPTLEAVGIHSAFSEHADYSGMSAHSG---LQTQNFL 329

  Fly   344 HKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAI--KDAQNTLFLGHVS 402
            |::.:.|.|:|..|:..|.:...|.|....|.|.   .:|||.|.:  :::.:.||.|..|
  Rat   330 HRSFLVVTEEGVEATAGTGVGFKVLSAASCELVH---CNHPFLFFVRHRESDSILFFGRFS 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 127/383 (33%)
Serpinb13NP_001100638.1 SERPIN 4..389 CDD:294093 128/386 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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