DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinb3

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:385 Identity:130/385 - (33%)
Similarity:202/385 - (52%) Gaps:25/385 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGL--------EGAGKT 90
            ||..:|:.||..|:.  ||.:||.||.|.||:..|||:|:|..:::..|.|        |.:..:
  Rat    10 QFTLELYRQLRDSED--NIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKSADS 72

  Fly    91 EVAEKLDQLLAK--GQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFT 153
            ...|.:.:...|  .|..|::|..|   ||..|.|:..:.|...||:.:.:.|.:.|..|:::|.
  Rat    73 HDEENVHEQFRKIMNQLNKSNGAYD---LKSPNSIYGAKGFPFLQTFMEDIKKYYQANVESLDFA 134

  Fly   154 QKA-DTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVN 217
            ..| ::.|.||||||.:|:.:||||....||::.|..:||||:|||..|...|.:..|....|..
  Rat   135 HAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTREDKFWL 199

  Fly   218 HGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLN 282
            :......|..|.|.:.|.|..|.:::||:||:||.|.::...|:||.|..||..:||||....|.
  Rat   200 NKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSADTLL 264

  Fly   283 EISS--QLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSP-GANLSSLYQGSEPLRISEVKH 344
            ..:|  .:|..::.:.||:||.:....|...||.:|:...|:| .|:.|.: ..::.|.:|:|.|
  Rat   265 AWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGM-SSTKGLVVSKVLH 328

  Fly   345 KAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIK--DAQNTLFLGHVS 402
            |:.:||||:|..|:.||.::..:.|   .....||..:.||...||  :..:.||.|.||
  Rat   329 KSFLEVNEEGAEAAAATGVETRILS---APRTTEFTCNRPFIVFIKPNNTNSILFFGRVS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 128/382 (34%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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