DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and LOC299282

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001376144.2 Gene:LOC299282 / 299282 RGDID:3745 Length:413 Species:Rattus norvegicus


Alignment Length:404 Identity:126/404 - (31%)
Similarity:195/404 - (48%) Gaps:46/404 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LQGLNLAMANTLNYSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTAD 76
            |..|.||.:||           .||..|:.:||.....:|:||||.||...|.:..|||:.||.:
  Rat    40 LHSLTLASSNT-----------DFALSLYKKLALRNPDKNVVFSPLSISAALTILSLGAKDSTME 93

  Fly    77 ELKLGL--GLEGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLV 139
            |:..||  .|....:.|:.:....||     ::.|..||..::...:.:|:.:...:...:|:..
  Rat    94 EILEGLKFNLTEITEEEIHQGFGHLL-----QRLSQPEDQVEINTGSALFIDKEQPILSEFQEKT 153

  Fly   140 SKNFAAAAENVNFTQKADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSS 204
            ...:.|.|...:|.|..:..|.||.:|..||..:|.:|.:  .|:..||.:|||.:.||..|:..
  Rat   154 RALYQAEAFIADFKQPNEAKKLINDYVSNQTQGKIAELFS--DLEERTSMVLVNYLLFKGKWKVP 216

  Fly   205 FPDYATYASDFVNHGGRKVSVDTMSQEDYFRFGELT-------ELKAKVVELPYTGTDIVFLIIL 262
            |....|:.|:|.....|.|.|..|      :..|:|       ||...|:||.||| :...|.||
  Rat   217 FNPNDTFESEFYLDEKRSVKVPMM------KIKEVTTPYVRDEELSCSVLELKYTG-NASALFIL 274

  Fly   263 PQEEQG-LAIVEEKLMGIDLNEISSQLRRRKVR-VQLPKFKFEFDVPLQAALEELGIKKLFSPGA 325
            |  :|| :..||..|....|.:....|..|.:. :::|||....|..|:..|.||||||:||..|
  Rat   275 P--DQGKMQQVESSLQPETLKKWKDSLIPRIINDLRMPKFSISTDYSLKEVLPELGIKKVFSQQA 337

  Fly   326 NLSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAI- 389
            :||.: .|::.|.:|:|.|||:::|:|.||.|:.||.:     :..|..:......:.||...| 
  Rat   338 DLSRI-TGTKDLYVSQVVHKAVLDVDETGTEATAATGV-----ATVIRRQPRTLNFNRPFMVVIT 396

  Fly   390 -KDAQNTLFLGHVS 402
             .|:|:.||:..::
  Rat   397 DMDSQSILFVAKIT 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 120/382 (31%)
LOC299282NP_001376144.2 serpinA3_A1AC 36..413 CDD:381019 126/404 (31%)
RCL 365..389 6/28 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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