DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and Serpinf1

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:394 Identity:103/394 - (26%)
Similarity:183/394 - (46%) Gaps:44/394 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YSKSPAGEAQFASQLFG-QLAKSQSGR----NIVFSPSSIRTGLALAYLGAEGSTADELKLGLGL 84
            :.|:|..:...|...|| .|.:.:||.    ||:.||.|:.|.|:...||||..|...:...|..
  Rat    46 FFKAPVNKLAAAVSNFGYDLYRLRSGAVSTGNILLSPLSVATALSALSLGAEQRTESVIHRALYY 110

  Fly    85 EGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAEN 149
            :.....::.....:||       ||........|.|:||...::.::..::...:.|::......
  Rat   111 DLINNPDIHSTYKELL-------ASVTAPEKNFKSASRIVFERKLRVKSSFVAPLEKSYGTRPRI 168

  Fly   150 VNFTQKADTAKHINSWVEEQTHQQIKDLIA------PESLDADTSAILVNAIYFKADWQSSFPDY 208
            :....:.| .:.||:||:    .|:|..||      |.:|    |.:|:...|||..|.:.|...
  Rat   169 LTGNPRID-LQEINNWVQ----AQMKGKIARSTREMPSAL----SILLLGVAYFKGQWATKFDSR 224

  Fly   209 ATYASDFVNHGGRKVSVDTMSQ-EDYFRFGELTELKAKVVELPYTGT-DIVFLIILPQEEQGLAI 271
            .|...||.....|.|.|..||. :...|:|..::|..|:.:||.||: .|:|.:.| ...|.|.:
  Rat   225 KTTLQDFHLDEDRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPLTGSMSIIFFLPL-TVTQNLTM 288

  Fly   272 VEEKLMGIDLNEISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLF-SPGANLSSLYQGSE 335
            :||.|....:::|..:|:..:..:.:||.|..::..:..:|:::.::.|| ||  :.|.:  ..:
  Rat   289 IEESLTSEFVHDIDRELKTIQAVLTVPKLKLSYEGDVTNSLQDMKLQSLFESP--DFSKI--TGK 349

  Fly   336 PLRISEVKHKAIIEVNEKGT-TASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQN--TLF 397
            |:::::|:|:|..|.||:|. |:|......|   .||.   ..::..:.||.|.::|...  .||
  Rat   350 PVKLTQVEHRAAFEWNEEGAGTSSNPDLQPV---RLTF---PLDYHLNRPFIFVLRDTDTGALLF 408

  Fly   398 LGHV 401
            :|.:
  Rat   409 IGRI 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 101/389 (26%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 103/394 (26%)

Return to query results.
Submit another query.