DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpina4

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_659565.2 Gene:Serpina4 / 246328 RGDID:708581 Length:423 Species:Rattus norvegicus


Alignment Length:447 Identity:126/447 - (28%)
Similarity:199/447 - (44%) Gaps:86/447 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CSLLLLQGLNLAMA----------NTLNYS------------KSPAGEAQFASQLFGQLAKSQSG 49
            |.||||.|| |.::          ||.|.:            :..:|.|.||.:|:..:|...|.
  Rat     6 CLLLLLAGL-LELSHSQPDQEEPDNTTNQTYRQFSQQNISSYQIASGNANFAFRLYHLIASQNSE 69

  Fly    50 RNIVFSPSSIRTGLALAYLGAEGSTADELKLGLG--LEGAGKTEVAE---KLDQLLAKGQWEKAS 109
            :||.|||.||...||:...||.|.|..::..|||  |......|:.|   .|...:|:...|   
  Rat    70 KNIFFSPLSISVSLAILSTGAGGDTQAQILEGLGFNLTKLSLPEIHEGFRSLQHTIARPFTE--- 131

  Fly   110 GDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHINSWVEEQTHQQI 174
                 |::...:.:.::|..::...:...:..::.:...:.||..|....:.||::|::.|..:|
  Rat   132 -----PQISVGSALILSQNLQILSEFVSAIETSYNSKVLHANFRDKEAAVQLINNYVKQNTQGKI 191

  Fly   175 KDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTMSQ--EDYFRFG 237
            |:|::  .|..|...:|||.|:|:..|:..||......|||.......|.:..|.|  ||:: :.
  Rat   192 KNLVS--DLSPDVKMVLVNYIFFQGLWKKPFPSSRVSTSDFYVDENTVVKIPMMLQDKEDHW-YL 253

  Fly   238 ELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQL--------RR---- 290
            |...:...|:.:.|.| |.|...|||  :||           .:||:...|        :|    
  Rat   254 EDRRVPCTVLRMDYRG-DAVAFFILP--DQG-----------KMNEVEQVLSPGMLLRWKRLLQN 304

  Fly   291 ----RKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVN 351
                ||:.:|||||.......|...|.:||.:.||:|.||.|::.: .|.|.:|:|.||.:::||
  Rat   305 RFFYRKLILQLPKFSISNSYELDEILPDLGFQDLFTPNANFSNISK-KEKLYLSKVFHKTVLDVN 368

  Fly   352 EKGT-----TASGATFIKVSVESLTIGEEVFEFIADHPFFFAI--KDAQNTLFLGHV 401
            |.||     |.|.|||.....:...:       |.:.||...:  ..:|:.||:|.|
  Rat   369 EVGTKAAAATGSFATFFSAQPKKRYL-------IFNRPFLVILYSTSSQDILFMGKV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 114/399 (29%)
Serpina4NP_659565.2 SERPIN 52..418 CDD:294093 113/398 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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