DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpina3j

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001094942.1 Gene:Serpina3j / 238395 MGIID:2182843 Length:420 Species:Mus musculus


Alignment Length:401 Identity:116/401 - (28%)
Similarity:181/401 - (45%) Gaps:37/401 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LQGLNLAMANTLNYSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTAD 76
            |..|.||..||           .||..|:.:||.....:|.||||.||...||...|||:|:|.:
Mouse    42 LDSLTLASINT-----------DFAFSLYKKLALKNPHKNFVFSPLSITIALASLSLGAKGNTLE 95

  Fly    77 ELKLGL--GLEGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLV 139
            |:..||  .|....:.::.:....||     ::.|...|..::...|.:.|.:..::...:::..
Mouse    96 EILEGLKFNLTETPEADIHQGFGHLL-----QRLSQPGDQVQISTGNSMVVEKHLQILAEFKEKA 155

  Fly   140 SKNFAAAAENVNFTQKADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSS 204
            ...:.......:|.|..:..|.:|.:|..||...||:|::  .|:..||.::.|...|...|..:
Mouse   156 RALYHTEVFTADFQQPREARKLLNDYVSNQTQGMIKELVS--DLEERTSMVMTNFALFNGKWNMT 218

  Fly   205 FPDYATYASDFVNHGGRKVSVDTMSQED----YFRFGELTELKAKVVELPYTGTDIVFLIILPQE 265
            |..|.|:...|:......|.|..|..::    |||.   .::|..||||.|.|.... :.|||  
Mouse   219 FDPYETFMGTFIEDRRTPVKVSMMKMKELRAPYFRD---EKMKCTVVELNYKGNGKA-MFILP-- 277

  Fly   266 EQG-LAIVEEKLMGIDLNEISSQLRRRKV-RVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLS 328
            :|| :..||..|....|......||.|.: .:.||||....:..|:..|.|||||::||..|:||
Mouse   278 DQGKMKQVEASLQPATLRGWRKSLRPRMIDELYLPKFSISKNYRLENILPELGIKEVFSTQADLS 342

  Fly   329 SLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAI--KD 391
            .: .|.:.:|:|.:.|.|.:::.|.||.|...|..|....|......|...  :.||.|.:  .|
Mouse   343 GI-SGGKDVRVSRMFHSAALDMTETGTEARATTRDKYDFLSTKSNPTVVNL--NTPFLFCVLHSD 404

  Fly   392 AQNTLFLGHVS 402
            ::|..|:|.::
Mouse   405 SENIDFMGKIN 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 110/383 (29%)
Serpina3jNP_001094942.1 serpinA3_A1AC 37..417 CDD:381019 116/401 (29%)

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