DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and Serpina10

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_659083.2 Gene:Serpina10 / 217847 MGIID:2667725 Length:448 Species:Mus musculus


Alignment Length:372 Identity:99/372 - (26%)
Similarity:180/372 - (48%) Gaps:16/372 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLD 97
            :.|...|..:::....| |::|||..:...:....||.:|.|..:::.||.|:..  ::....:.
Mouse    84 SSFGFNLLRKISMRHDG-NVIFSPFGLSVAMVNLMLGTKGETKVQIENGLNLQAL--SQAGPLIL 145

  Fly    98 QLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHI 162
            ..|.|...|..|.:.|: .|...:..|:.:.|.:.:||.:|..|.|.....::||...:.....|
Mouse   146 PALFKKVKETFSSNRDL-GLSQGSFAFIHKDFDIKETYFNLSKKYFDIEYVSINFQNSSQARGLI 209

  Fly   163 NSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDT 227
            |..:.::|..:|..|.  :.::.:|..|||:.:.||..|.:.|....|.|..|.....|.:.|..
Mouse   210 NHCIVKETEGKIPKLF--DEINPETKLILVDYVLFKGKWLTPFDPSFTEADTFHLDKYRAIKVPM 272

  Fly   228 MSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQ-LRRR 291
            |.:|..|......:.:..:::|||.|...:.::::  |:.|..:..|..:.:||.|...| ::.|
Mouse   273 MYREGNFTSTFDKKFRCHILKLPYQGNATMLVVLM--EKTGDYLALEDYLTVDLVETWLQNMKTR 335

  Fly   292 KVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGTT 356
            |:.|..||||......:...|:::||::|||..|:||.|...:..|::|.|..::::||:|:||.
Mouse   336 KMEVFFPKFKLNQRYEMHELLKQMGIRRLFSTSADLSELSAMARNLQVSRVLQQSVLEVDERGTE 400

  Fly   357 ASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKD--AQNTLFLGHV 401
            |...|..::...|:....:|     :.||.|.|.:  ::..||||.|
Mouse   401 AVSGTLSEIIAYSMPPAIKV-----NRPFHFIIYEEMSRMLLFLGRV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 98/370 (26%)
Serpina10NP_659083.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..70
SERPIN 78..442 CDD:294093 98/370 (26%)
Heparin-binding. /evidence=ECO:0000250 140..157 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.