DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpina3k

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_035588.2 Gene:Serpina3k / 20714 MGIID:98377 Length:418 Species:Mus musculus


Alignment Length:403 Identity:129/403 - (32%)
Similarity:191/403 - (47%) Gaps:48/403 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LNLAMANTLNYSKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELK 79
            |.||..||           .||..|:.:||.....:||||||.||...|||..|||:|.|.:|:.
Mouse    46 LTLASVNT-----------DFAFSLYKKLALKNQDKNIVFSPLSISAALALVSLGAKGKTMEEIL 99

  Fly    80 LGL--GLEGAGKTEVAEKLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKN 142
            .||  .|....:.::.:....||     :..|..||..::...|.:|:.:..::...:.:.....
Mouse   100 EGLKFNLTETPEADIHQGFGNLL-----QSLSQPEDQDQINIGNAMFIEKDLQILAEFHEKTRAL 159

  Fly   143 FAAAAENVNFTQKADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPD 207
            :...|...:|.|..:....||.:|..||...||.||:  .||..|..:|||.||||..|:.||..
Mouse   160 YQTEAFTADFQQPTEAKNLINDYVSNQTQGMIKKLIS--ELDDGTLMVLVNYIYFKGKWKISFDP 222

  Fly   208 YATYASDFVNHGGRKVSVDTMSQE----DYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQG 268
            ..|:.|:|.....|.|.|..|..:    .:||.   .||...|:||.||| :...|:|||  :||
Mouse   223 QDTFESEFYLDEKRSVKVPMMKMKLLTARHFRD---EELSCSVLELKYTG-NASALLILP--DQG 281

  Fly   269 -LAIVEEKLMGIDLNE-----ISSQLRRRKVRVQLPKFKFEFDVPLQA-ALEELGIKKLFSPGAN 326
             :..||..|....|.:     .|||:.    .:.||||....|..|:. .|.|:|||::|:..|:
Mouse   282 RMQQVEASLQPETLRKWRKTLFSSQIE----ELNLPKFSIASDYRLEEDVLPEMGIKEVFTEQAD 342

  Fly   327 LSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAI-- 389
            ||.:.: ::.|.:|:|.|||:::|.|.||.|:.||.:...:....:....|    :.||...|  
Mouse   343 LSGITE-AKKLSVSQVVHKAVLDVAETGTEAAAATGVIGGIRKAVLPAVCF----NRPFLIVIYH 402

  Fly   390 KDAQNTLFLGHVS 402
            ..||:.||:..|:
Mouse   403 TSAQSILFMAKVN 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 123/384 (32%)
Serpina3kNP_035588.2 SERPIN 57..417 CDD:214513 122/381 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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