DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpinb6b

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:379 Identity:119/379 - (31%)
Similarity:203/379 - (53%) Gaps:21/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLE---GAGKTEVAE 94
            |.||..|...|.: .|.||::|||.|:.:.||:.::||:|:||.::...|.|:   |.|..:|.:
Mouse     9 ATFALNLLKTLGE-DSSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDKCSGKGGRDVHQ 72

  Fly    95 KLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTA 159
            ....||.:   ...:|.:.|  |:.|||:|..:.|.:..:::|...|.:.|..|.::|....:.:
Mouse    73 GFQSLLTE---TNKTGTQYV--LRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQS 132

  Fly   160 K-HINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKV 223
            : |||:||.::|..:|.:|::..|::::|..:||||||||.:|:..|....|....|........
Mouse   133 RQHINAWVAKKTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVK 197

  Fly   224 SVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEIS--S 286
            .|..|.|:..|:...:.|:...::.|||.|.::..:|:||.|...|::||:::......|.:  .
Mouse   198 PVQMMFQKSTFKMTYVEEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLD 262

  Fly   287 QLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG-ANLSSLYQGSEPLRISEVKHKAIIEV 350
            ::...:|.|.|||||.|.:..::..|..||:...|..| |:.|.: ...|.|.:|:|.||:.:||
Mouse   263 KMEEEEVEVFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSGI-ASKEGLFLSKVIHKSFVEV 326

  Fly   351 NEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNT--LFLGHVS 402
            ||:||.|:.||...:....:     |..|.|:|||.|.|:.::.:  :|.|..|
Mouse   327 NEEGTEAAAATAANIGFRCM-----VPYFCANHPFLFFIQHSRTSGIVFCGRFS 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 118/376 (31%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 119/379 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.730

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