DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and Serpinb6b

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:379 Identity:119/379 - (31%)
Similarity:203/379 - (53%) Gaps:21/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLE---GAGKTEVAE 94
            |.||..|...|.: .|.||::|||.|:.:.||:.::||:|:||.::...|.|:   |.|..:|.:
Mouse     9 ATFALNLLKTLGE-DSSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSLDKCSGKGGRDVHQ 72

  Fly    95 KLDQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTA 159
            ....||.:   ...:|.:.|  |:.|||:|..:.|.:..:::|...|.:.|..|.::|....:.:
Mouse    73 GFQSLLTE---TNKTGTQYV--LRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQS 132

  Fly   160 K-HINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKV 223
            : |||:||.::|..:|.:|::..|::::|..:||||||||.:|:..|....|....|........
Mouse   133 RQHINAWVAKKTEDKITELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVK 197

  Fly   224 SVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEIS--S 286
            .|..|.|:..|:...:.|:...::.|||.|.::..:|:||.|...|::||:::......|.:  .
Mouse   198 PVQMMFQKSTFKMTYVEEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLD 262

  Fly   287 QLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG-ANLSSLYQGSEPLRISEVKHKAIIEV 350
            ::...:|.|.|||||.|.:..::..|..||:...|..| |:.|.: ...|.|.:|:|.||:.:||
Mouse   263 KMEEEEVEVFLPKFKLEENYDMKDVLCRLGMTDAFEEGMADFSGI-ASKEGLFLSKVIHKSFVEV 326

  Fly   351 NEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNT--LFLGHVS 402
            ||:||.|:.||...:....:     |..|.|:|||.|.|:.::.:  :|.|..|
Mouse   327 NEEGTEAAAATAANIGFRCM-----VPYFCANHPFLFFIQHSRTSGIVFCGRFS 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 119/379 (31%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:476815 119/379 (31%)

Return to query results.
Submit another query.