DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpina1d

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:426 Identity:120/426 - (28%)
Similarity:202/426 - (47%) Gaps:44/426 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVKATCSLLLLQGL----------NLAMANTLNYSKSPAGE------AQFASQLFGQLAKSQSG 49
            |:...:.|||||.||          ::...:|....:|||..      ..||.:|:.:|....:.
Mouse     1 MTPSISWSLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFALRLYRELVHQSNT 65

  Fly    50 RNIVFSPSSIRTGLALAYLGAEGSTADELKLGL--GLEGAGKTEVAEKLDQLLAKGQWEKASGDE 112
            .||.|||.||.|..|:..||::|.|..::..||  .|....:.::.:....||     :..:..:
Mouse    66 SNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLL-----QTLNRPD 125

  Fly   113 DVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHINSWVEEQTHQQIKDL 177
            ...:|...|.:||....||.:.:.:....::.|...:|||.:..:..|.||.:||:.|..:|.: 
Mouse   126 SELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIVE- 189

  Fly   178 IAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTMSQEDYFRFGELTEL 242
             |.:.||.||...|.|.|.||..|:..|....|..::|.......|.|..|:..........:.|
Mouse   190 -AVKKLDQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVHHCSML 253

  Fly   243 KAKVVELPYTG-TDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQL----RRRKVRVQLPKFKF 302
            .:.|:.:.|.| |..|||  ||.:.: :..:|:.|.    .|:.||.    ||...::.:|:...
Mouse   254 SSWVLLMDYAGNTTAVFL--LPDDGK-MQHLEQTLN----KELISQFLLNRRRSDAQIHIPRLSI 311

  Fly   303 EFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGATFIKVSV 367
            ..:..|:..:..|||.::|:.||:||.:.:.:.||::|:..|||::.::|.||.|:.||.::|:.
Mouse   312 SGNYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDETGTEAAAATVLQVAT 376

  Fly   368 ESLTIGEEVFEFIADHPFFFAI--KDAQNTLFLGHV 401
            .|:   ..:..|  ||||.|.|  :..|:.:|:|.|
Mouse   377 YSM---PPIVRF--DHPFLFIIFEEHTQSPIFVGKV 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 109/387 (28%)
Serpina1dNP_033272.1 serpinA1_A1AT 44..412 CDD:381012 108/383 (28%)
RCL 368..387 5/23 (22%)

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