DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and srp-7

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001122924.1 Gene:srp-7 / 179195 WormBaseID:WBGene00005648 Length:373 Species:Caenorhabditis elegans


Alignment Length:372 Identity:130/372 - (34%)
Similarity:201/372 - (54%) Gaps:35/372 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKTEVAEKLDQ------- 98
            |.|.:.....::.|||.||...|:|.::.|:|.|.|:::     |...|....|:|:|       
 Worm    21 GLLRQQNISESLAFSPLSIALALSLVHVAAKGETRDQIR-----EALVKGSTDEQLEQHFANISA 80

  Fly    99 -LLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHI 162
             |||.         |...::|.||.:|....||:.|:|.|.|.|.:.|.|.:::|..|..||:.|
 Worm    81 ALLAA---------ERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAI 136

  Fly   163 NSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDT 227
            |::|.|.|...||.:|..:|:::|..|:|.||:|||||||:.|...:|:.|:|.:....|..:|.
 Worm   137 NNFVRENTGDHIKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDF 201

  Fly   228 MSQEDYFR-FGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGID---LNEISSQL 288
            :......| :.|..:.  :|:.|||........|.||:...||.   |.|..:|   :..:.|.:
 Worm   202 LHASSVSRDYAENDQF--QVLSLPYKDNTFALTIFLPKTRFGLT---ESLKTLDSATIQHLLSNV 261

  Fly   289 RRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEK 353
            ....|.||:||:|.|..:.|:.||:.|||||.|...|:|.::..|   |.:|:|.|||:|||:|:
 Worm   262 SSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADLGNMADG---LYVSKVTHKALIEVDEE 323

  Fly   354 GTTASGATFIKVSVES-LTIGEEVFEFIADHPFFFAIKDAQNTLFLG 399
            ||.|:.||.:.:|::| :.:.||..:|.|||||||.:....:.||:|
 Worm   324 GTKAAAATTVSISLKSAMFVMEEPKDFTADHPFFFVLSKDNHPLFVG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 130/372 (35%)
srp-7NP_001122924.1 serpinL_nematode 14..372 CDD:381047 130/372 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I1654
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 210 0.433 Inparanoid score I2373
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.980

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