DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and srp-2

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:376 Identity:139/376 - (36%)
Similarity:211/376 - (56%) Gaps:23/376 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SKSPAGEAQFASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGAGKT 90
            |.:...:..||.:|...|..|.|   :|.||.||..||||.:.||.|||..||:     :..|.:
 Worm     2 SDNATSQTDFALKLLATLPHSGS---VVLSPLSISLGLALIHAGACGSTQKELE-----DVLGGS 58

  Fly    91 EVAEKLDQLLAKGQWEKASGDED-VPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQ 154
            .:.|:...|:      :|.||.| ..:.|..||:||.|.:.:.|.|.:.|.|.:.|:.|:::|:|
 Worm    59 RIFEEFSGLM------EAVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQ 117

  Fly   155 KADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHG 219
            ....||.:|::||..|:.:|||||..:|.: :..|.||||:||||||||.|...:|...:|....
 Worm   118 TEQAAKTMNTFVENHTNGKIKDLIPADSAN-NAFAFLVNAMYFKADWQSKFAKESTTGREFFTSE 181

  Fly   220 GRKVSVDTMSQEDYFRFGELTE-LKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNE 283
            .....:..:::.|..|  :.|| :..:|:.|.|........|.||::..||....||:.|..:..
 Worm   182 AESRQIPFLTELDEHR--DYTEDVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALEKINGEYIQN 244

  Fly   284 ISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAII 348
            :.:.|:...|.||:||||.|.::.|:..||.:|||::|:.||:||.:   ::.:.||...|||||
 Worm   245 LLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGI---ADKVFISSGIHKAII 306

  Fly   349 EVNEKGTTASGATFIKVSVESLTIGEEVFEFIADHPFFFAIKDAQNTLFLG 399
            ||:|.||||:.|:..||.:|.:.:.|.. :|:|||||.||:....:|||||
 Worm   307 EVDEDGTTAAAASAFKVQLEMMIMAEPT-QFVADHPFLFAVLFENHTLFLG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 138/371 (37%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 138/371 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 209 1.000 Domainoid score I1654
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 210 0.433 Inparanoid score I2373
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm4841
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3483
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.910

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