DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn42De and Serpind1

DIOPT Version :10

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_032249.3 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:412 Identity:111/412 - (26%)
Similarity:190/412 - (46%) Gaps:49/412 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLLQGLN-LAMANTLNYSKSPAGEAQFASQLFGQLAKSQ--SGRNIVFSPSSIRTGLALAYLGA 70
            |.|.||.: :...|.||        |:||..|: ::.|.|  :..|:..:|..|.|.:.:..||.
Mouse    93 LQLFQGKSRIQRLNILN--------AKFAFNLY-RVLKDQATTSDNLFIAPVGISTAMGMISLGL 148

  Fly    71 EGSTADELKLGLG----LEGAGKTEVA------EKLDQLLAKGQWEKASGDEDVPKLKYANRIFV 125
            .|.|.:|:...|.    :..:.|.||.      .||...|.:..:...        |:..|.:::
Mouse   149 RGETHEEVHSVLHFRDFVNASSKYEVTTIHNLFRKLTHRLFRRNFGYT--------LRSVNGLYI 205

  Fly   126 TQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKHINSWVEEQTHQQIKDLIAPESLDADTSAI 190
            .::|.:.:.::..:.:.:.|.|:..||...|..:| .|:.:.:.|...||:  |.|::|..|..:
Mouse   206 QKQFPIREDFKAAMREFYFAEAQEANFPDPAFISK-ANNHILKLTKGLIKE--ALENIDPATQML 267

  Fly   191 LVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVDTMSQEDYFRFGELTELKAKVVELPYTGTD 255
            ::|.||||..|.:.||...|:..:|..:....|.|..|..:..|......||...:::|.|.| .
Mouse   268 ILNCIYFKGTWVNKFPVEMTHNHNFRLNEREVVKVSMMQTKGNFLAANDQELDCDILQLEYVG-G 331

  Fly   256 IVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKL 320
            |..||::|::..|:..:|.:|....:......:..|...|.|||||.|.:..|...|:.:||.||
Mouse   332 ISMLIVVPRKLSGMKTLEAQLTPQVVERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKL 396

  Fly   321 FSPGANLSSLYQGSEPLRISEVKHKAIIEVNEKGTTASGAT---FIKVSVESLTIGEEVFEFIAD 382
            |:...|:|.:  ..:.:.|...||::.|.|||:||.|:..|   |:.:|.:        ..|..|
Mouse   397 FNKNGNMSGI--SDQRIAIDLFKHQSTITVNEEGTQAAAVTTVGFMPLSTQ--------VRFTVD 451

  Fly   383 HPFFFAIKDAQNT--LFLGHVS 402
            .||.|.:.:.:.:  ||:|.|:
Mouse   452 RPFLFLVYEHRTSCLLFMGKVT 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 serpin42Dd-like_insects 30..403 CDD:381070 104/390 (27%)
Serpind1NP_032249.3 serpinD1_HCF2 32..478 CDD:381004 111/412 (27%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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