DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn42De and LOC110439158

DIOPT Version :9

Sequence 1:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_021329696.1 Gene:LOC110439158 / 110439158 -ID:- Length:412 Species:Danio rerio


Alignment Length:378 Identity:116/378 - (30%)
Similarity:171/378 - (45%) Gaps:28/378 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FASQLFGQLAKS--QSGRNIVFSPSSIRTGLALAYLGAEGSTADELKLGLGLEGA-GKTEVAEKL 96
            ||..|:.:|.:|  ...:||.|||.::...|:...|||.|.|..:|..|:|...| ..||...:|
Zfish    43 FAFHLYKRLIESPDYQSKNIFFSPFTVSMALSKLTLGAGGDTKQQLLSGIGYNSAIFSTEEMHQL 107

  Fly    97 DQLLAKGQWEKASGDEDVPKLKYANRIFVTQRFKLTQTYQDLVSKNFAAAAENVNFTQKADTAKH 161
            ...|.:....:...|.|:....||     :.|||....:.:.:.:.:......|:|..| :|...
Zfish   108 FHSLLEDIGNRTGVDIDIGTALYA-----SDRFKPHSKFLEDMKEFYHTDGFTVDFRVK-ETVDQ 166

  Fly   162 INSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKADWQSSFPDYATYASDFVNHGGRKVSVD 226
            ||.:|||:||.:|..  |.:.|:.||...|:..||||..|...|....|..|.|.......|.|.
Zfish   167 INKYVEEKTHGKINQ--AVDDLEKDTLMFLLTYIYFKGKWDKPFNPEKTCESTFHIDDKTTVPVQ 229

  Fly   227 TMSQEDYFRFGELTELKAKVVELPYTGTDIVFLIILPQEEQGLAIVEEKLMGIDLNEISSQLR-- 289
            .|.|.:|.:.....||..||:.|.|..:..:||.: |....|...:|:..|.|....|....|  
Zfish   230 MMHQYEYLKVYYDAELSIKVLCLDYNDSFSMFLAV-PDVHMGRKTIEDLEMTISRQHIEKWKRSA 293

  Fly   290 -RRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPGANLSSLYQGSEPLRISEVKHKAIIEVNEK 353
             .|||.:.:||...:....|...|:.:|:..:||..|:.:.:  ..|.:.||:|.|||.::::||
Zfish   294 FERKVDIYVPKLSLKTSYFLNDILKGMGMADMFSDKADFTGV--SEEKIFISKVVHKATLDIDEK 356

  Fly   354 GTTASGAT---FIKVSVESLTIGEEVFEFIADHPFFFAIKDA--QNTLFLGHV 401
            ||||:..|   |.::|...|:    ...|  |.||...|.|.  .|.||.|.|
Zfish   357 GTTAAAVTTVQFRQLSYSPLS----TLSF--DRPFMIFITDQTNDNILFFGKV 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 115/376 (31%)
LOC110439158XP_021329696.1 alpha-1-antitrypsin_like 40..403 CDD:239011 115/376 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.